RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 SMIM24O75264 130 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 LYNP07948 512 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 RHOP08100 348 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 MC4RP32245 332 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 RFTN1Q14699 578 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 SETMARQ53H47 684 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 ACAD11Q709F0 780 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 PDSS2Q86YH6 399 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 PAF1Q8N7H5 531 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 TSC22D3Q99576 134 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 CCDC28BQ9BUN5 200 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 KLHL4Q9C0H6 718 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 ABCG8Q9H221 673 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 PRPF19Q9UMS4 504 aaKnown RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 RGSL1A5PLK6 1076 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 PPP6CO00743 305 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 SORBS2O94875 1100 aaKnown RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 UBTFL6P0CB48 400 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 PIK3R1P27986 724 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 PPIGQ13427 754 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHD3-211ENST00000481999 PDCD2Q16342 344 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 TCHHL1Q5QJ38 904 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 TMEM198Q66K66 360 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 C16orf89Q6UX73 402 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 CCDC149Q6ZUS6 474 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 GRASPQ7Z6J2 395 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 FAM217AQ8IXS0 508 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 C12orf76Q8N812 135 aaPredicted RBP14.39□□□□□ -0.11
CHD3-211ENST00000481999 DCAF4L2Q8NA75 395 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 SORCS1Q8WY21 1168 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 VOPP1Q96AW1 172 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 SLCO3A1Q9UIG8 710 aa14.39□□□□□ -0.11
CHD3-211ENST00000481999 A8MT66 165 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 SIX3O95343 332 aaPredicted RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 CRTAMO95727 393 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 FESP07332 822 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 LTA4HP09960 611 aaKnown RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 ADSLP30566 484 aaPredicted RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 SERPINB5P36952 375 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 TAF1AQ15573 450 aaPredicted RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 FUT11Q495W5 492 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 ZRANB3Q5FWF4 1079 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 MRNIPQ6NTE8 343 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 RNF111Q6ZNA4 994 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 TRIM67Q6ZTA4 783 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 ISCA2Q86U28 154 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 ELMOD1Q8N336 334 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 CPSF7Q8N684 471 aaKnown RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 RP9Q8TA86 221 aaKnown RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 SERPINI1Q99574 410 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 AHCYL1O43865 530 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 NIPSNAP2O75323 286 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 CDH13P55290 713 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 LSM12Q3MHD2 195 aaKnown RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 RNF220Q5VTB9 566 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 PAQR3Q6TCH7 311 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 TSPAN33Q86UF1 283 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 KBTBD6Q86V97 674 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 KYQ8NBH2 561 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 HIPK4Q8NE63 616 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 GDPD5Q8WTR4 605 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 MRPL57Q9BQC6 102 aaKnown RBP14.38□□□□□ -0.11
CHD3-211ENST00000481999 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 STK39Q9UEW8 545 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 ADAMTS6Q9UKP5 1117 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 CDYLQ9Y232 598 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 WNT6Q9Y6F9 365 aa14.38□□□□□ -0.11
CHD3-211ENST00000481999 MTCL1Q9Y4B5 1905 aaKnown RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 A0A087X1B8 175 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 C2orf81A6NN90 581 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 GRID2O43424 1007 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 FZD6O60353 706 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 ZNF37AP17032 561 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 LPOP22079 712 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 FDXRP22570 491 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 PPARGP37231 505 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 NUDT2P50583 147 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 OR4D1Q15615 310 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 INO80DQ53TQ3 878 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 C9orf50Q5SZB4 431 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 FAM151BQ6UXP7 276 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 SNX32Q86XE0 403 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 TTC30BQ8N4P2 665 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 LPGAT1Q92604 370 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 BIRC8Q96P09 236 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 LRRC3BQ96PB8 259 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 GCNAQ96QF7 691 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 C2orf49Q9BVC5 232 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 FAM192AQ9GZU8 254 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 MTG2Q9H4K7 406 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 EBF3Q9H4W6 596 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 AIM2O14862 343 aa14.37□□□□□ -0.11
CHD3-211ENST00000481999 CASQ2O14958 399 aaPredicted RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 STX7O15400 261 aaKnown RBP14.37□□□□□ -0.11
CHD3-211ENST00000481999 PEX1O43933 1283 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms