RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PTPRCP08575 1304 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 LIPT2A6NK58 231 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 F5H0A9 414 aaPredicted RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 BMPR1BO00238 502 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 ATP2A1O14983 1001 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 RNASEH2AO75792 299 aaKnown RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 CAMTA2O94983 1202 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 DDX58O95786 925 aaKnown RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 SCGB1D1O95968 90 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 LAMP2P13473 410 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 GNL1P36915 607 aaPredicted RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 APOBEC1P41238 236 aaKnown RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 CLDN20P56880 219 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 MAD2L1Q13257 205 aaPredicted RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 ADIPOQQ15848 244 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 FAM180BQ6P0A1 224 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 MAATS1Q7Z4T9 603 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 SMIM29Q86T20 159 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.05□□□□□ -1.6
CALD1-219ENST00000480638 PDILTQ8N807 584 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 OR5R1Q8NH85 324 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 THAP6Q8TBB0 222 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 CD101Q93033 1021 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 PIGTQ969N2 578 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 C1orf74Q96LT6 269 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 SEPT5Q99719 369 aaPredicted RBP5.05□□□□□ -1.6
CALD1-219ENST00000480638 CHMP4AQ9BY43 222 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 COPG2Q9UBF2 871 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 FBXL2Q9UKC9 423 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 OR2W1Q9Y3N9 320 aa5.05□□□□□ -1.6
CALD1-219ENST00000480638 TCF20Q9UGU0 1960 aaKnown RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 PGPEP1LA6NFU8 196 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 HS3ST1O14792 307 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 XPNPEP2O43895 674 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 USO1O60763 962 aaKnown RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 PRCPP42785 496 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 ISL1P61371 349 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 DCAF7P61962 342 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 MRPS34P82930 218 aaKnown RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 ARL16Q0P5N6 197 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 ZNF234Q14588 700 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 SYT16Q17RD7 645 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 PNLIPRP3Q17RR3 467 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 C9orf50Q5SZB4 431 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 IRAK1BP1Q5VVH5 260 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 C18orf63Q68DL7 685 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 GLDNQ6ZMI3 551 aaPredicted RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 SLC9B2Q86UD5 537 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 GPR180Q86V85 440 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 MUC20Q8N307 709 aaPredicted RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 OR1J2Q8NGS2 313 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 SLC38A5Q8WUX1 472 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 ZKSCAN4Q969J2 545 aaPredicted RBP5.04□□□□□ -1.6
CALD1-219ENST00000480638 ITPAQ9BY32 194 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 PIGMQ9H3S5 423 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 KRT84Q9NSB2 600 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 STK39Q9UEW8 545 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 ZNF112Q9UJU3 913 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 ZNF711Q9Y462 761 aa5.04□□□□□ -1.6
CALD1-219ENST00000480638 A0A087WYN8 130 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 KANSL1LA0AUZ9 987 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 ASPDHA6ND91 283 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 CD53P19397 219 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 KCNA5P22460 613 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 ARL3P36405 182 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 IL15P40933 162 aaPredicted RBP5.03□□□□□ -1.6
CALD1-219ENST00000480638 PIK3CAP42336 1068 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 TAS2R40P59535 323 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 SETQ01105 290 aaPredicted RBP5.03□□□□□ -1.6
CALD1-219ENST00000480638 ACSM2AQ08AH3 577 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 NAB2Q15742 525 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 CCDC96Q2M329 555 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 ZNF805Q5CZA5 627 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 LRIF1Q5T3J3 769 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 PAPD4Q6PIY7 484 aaKnown RBP5.03□□□□□ -1.6
CALD1-219ENST00000480638 ASB18Q6ZVZ8 466 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 NGEFQ8N5V2 710 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 MAB21L3Q8N8X9 362 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 DNASE2BQ8WZ79 361 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 INPP4AQ96PE3 977 aaPredicted RBP5.03□□□□□ -1.6
CALD1-219ENST00000480638 SYT17Q9BSW7 474 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 MAGIXQ9H6Y5 334 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 TCF7L2Q9NQB0 619 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 UBA2Q9UBT2 640 aaPredicted RBP5.03□□□□□ -1.6
CALD1-219ENST00000480638 FBXW11Q9UKB1 542 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 CORO1CQ9ULV4 474 aaPredicted RBP5.03□□□□□ -1.6
CALD1-219ENST00000480638 DLGAP4Q9Y2H0 992 aa5.03□□□□□ -1.6
CALD1-219ENST00000480638 PI4KAP2A4QPH2 592 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 FAM90A26D6RGX4 464 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 ANKRD28O15084 1053 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 SCAMP1O15126 338 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 KCNN4O15554 427 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 DAB1O75553 588 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 IGLV2-11P01706 119 aa5.02□□□□□ -1.61
CALD1-219ENST00000480638 ICAM1P05362 532 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms