RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 MMP2P08253 660 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 KRT7P08729 469 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 MX2P20592 715 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 CA4P22748 312 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 CSTF2P33240 577 aaKnown RBP eCLIP18.68■□□□□ 0.58
ABCF3-214ENST00000480562 CD86P42081 329 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 SPINT3P49223 89 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 RPL26P61254 145 aaKnown RBP18.68■□□□□ 0.58
ABCF3-214ENST00000480562 LRP8Q14114 963 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 CHST15Q7LFX5 561 aaPredicted RBP18.68■□□□□ 0.58
ABCF3-214ENST00000480562 SFRP1Q8N474 314 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 ZSCAN1Q8NBB4 408 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 HTR3CQ8WXA8 447 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 ART4Q93070 314 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 LYSMD1Q96S90 227 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 SLC38A3Q99624 504 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 HAUS2Q9NVX0 235 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 OCIAD1Q9NX40 245 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 DTLQ9NZJ0 730 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 UVRAGQ9P2Y5 699 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 RPL26L1Q9UNX3 145 aaKnown RBP18.68■□□□□ 0.58
ABCF3-214ENST00000480562 KCNK6Q9Y257 313 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 B3GALT1Q9Y5Z6 326 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 BOD1L1Q8NFC6 3051 aa18.68■□□□□ 0.58
ABCF3-214ENST00000480562 ZFC3H1O60293 1989 aaKnown RBP18.68■□□□□ 0.58
ABCF3-214ENST00000480562 STMND1H3BQB6 276 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 H2AFZP0C0S5 128 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 FAM87AP0C7U9 286 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 FASLGP48023 281 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 TBR1Q16650 682 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 SNAP47Q5SQN1 464 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 TMEM71Q6P5X7 295 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 H2AFVQ71UI9 128 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 PRICKLE2Q7Z3G6 844 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 CTNNBL1Q8WYA6 563 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-214ENST00000480562 NKD1Q969G9 470 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 HDAC11Q96DB2 347 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 AHCYL2Q96HN2 611 aaKnown RBP18.67■□□□□ 0.58
ABCF3-214ENST00000480562 FAM83DQ9H4H8 585 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 ARFGAP3Q9NP61 516 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 SLC39A1Q9NY26 324 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 PKD2L2Q9NZM6 624 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 VPS18Q9P253 973 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 TBC1D29Q9UFV1 150 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 PCDHGA3Q9Y5H0 932 aa18.67■□□□□ 0.58
ABCF3-214ENST00000480562 EFCAB7A8K855 629 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 A8MU76 341 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 ANKRD66B4E2M5 251 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 ACP5P13686 325 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 KDELR1P24390 212 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 GPLD1P80108 840 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 ZBTB17Q13105 803 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 NFATC2Q13469 925 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 GALNT3Q14435 633 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.66■□□□□ 0.58
ABCF3-214ENST00000480562 HENMT1Q5T8I9 393 aaKnown RBP18.66■□□□□ 0.58
ABCF3-214ENST00000480562 FAM129CQ86XR2 697 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 CNTD1Q8N815 330 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 CCDC112Q8NEF3 446 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 OR10G6Q8NH81 332 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 ZNF830Q96NB3 372 aaPredicted RBP18.66■□□□□ 0.58
ABCF3-214ENST00000480562 RNF157Q96PX1 679 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 DPYSL5Q9BPU6 564 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 MLPHQ9BV36 600 aaPredicted RBP18.66■□□□□ 0.58
ABCF3-214ENST00000480562 CEP41Q9BYV8 373 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 HEY1Q9Y5J3 304 aa18.66■□□□□ 0.58
ABCF3-214ENST00000480562 LRRD1A4D1F6 860 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 DUX1O43812 170 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 SNX2O60749 519 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 HNRNPH3P31942 346 aaKnown RBP18.65■□□□□ 0.58
ABCF3-214ENST00000480562 UGT1A3P35503 534 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 ATP1A2P50993 1020 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 NFKB2Q00653 900 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 HHEXQ03014 270 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 PPIDQ08752 370 aaKnown RBP18.65■□□□□ 0.58
ABCF3-214ENST00000480562 MESDQ14696 234 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 SLC18A3Q16572 532 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 ZNF648Q5T619 568 aaPredicted RBP18.65■□□□□ 0.58
ABCF3-214ENST00000480562 IYDQ6PHW0 289 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 LYSMD3Q7Z3D4 306 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 KDELC2Q7Z4H8 507 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 RAVER1Q8IY67 606 aaKnown RBP18.65■□□□□ 0.58
ABCF3-214ENST00000480562 CCHCR1Q8TD31 782 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 EID2BQ96D98 161 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 DDA1Q9BW61 102 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 FAM117AQ9C073 453 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 XPO4Q9C0E2 1151 aaKnown RBP18.65■□□□□ 0.58
ABCF3-214ENST00000480562 BRD8Q9H0E9 1235 aa18.65■□□□□ 0.58
ABCF3-214ENST00000480562 B4E171 279 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 PIRTP0C851 137 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 ITGB6P18564 788 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 MAN1A1P33908 653 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 TSPAN7P41732 249 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 MAPK9P45984 424 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 IFI35P80217 286 aaPredicted RBP18.64■□□□□ 0.57
ABCF3-214ENST00000480562 ALS2CLQ60I27 953 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 ANKS6Q68DC2 871 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 XKR5Q6UX68 686 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 IL22RA1Q8N6P7 574 aa18.64■□□□□ 0.57
ABCF3-214ENST00000480562 PLD5Q8N7P1 536 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms