RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TOP3BO95985 862 aaKnown RBP26.59■■□□□ 1.85
CCM2-211ENST00000478582 IVDP26440 423 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 EPHA8P29322 1005 aaPredicted RBP26.59■■□□□ 1.85
CCM2-211ENST00000478582 HADHAP40939 763 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 NPY2RP49146 381 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 ANKRD22Q5VYY1 191 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 NAT8LQ8N9F0 302 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 SAP25Q8TEE9 199 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 STYXQ8WUJ0 223 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 TBATAQ96M53 351 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 DNAJC28Q9NX36 388 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 KLF15Q9UIH9 416 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 RIMKLBQ9ULI2 386 aa26.59■■□□□ 1.85
CCM2-211ENST00000478582 GLYATL1P3A0A0U1RQE8 302 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 HEATR9A2RTY3 570 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 TTI1O43156 1089 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 MLNP12872 115 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 ADRA1DP25100 572 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 BLKP51451 505 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 SRP54P61011 504 aaKnown RBP26.58■■□□□ 1.85
CCM2-211ENST00000478582 HNRNPKP61978 463 aaKnown RBP eCLIP26.58■■□□□ 1.85
CCM2-211ENST00000478582 PPARDQ03181 441 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 ALG11Q2TAA5 492 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 INAVAQ3KP66 663 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 KANSL1Q7Z3B3 1105 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 PCGF5Q86SE9 256 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 PPIL6Q8IXY8 311 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 OR13C4Q8NGS5 318 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 BTN2A2Q8WVV5 523 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 VPS35Q96QK1 796 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 SCNM1Q9BWG6 230 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 NLE1Q9NVX2 485 aaPredicted RBP26.58■■□□□ 1.85
CCM2-211ENST00000478582 KLQ9UEF7 1012 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 APPL1Q9UKG1 709 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 APOBEC2Q9Y235 224 aaKnown RBP26.58■■□□□ 1.85
CCM2-211ENST00000478582 SLC17A4Q9Y2C5 497 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 MRFAP1Q9Y605 127 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 DGKBQ9Y6T7 804 aa26.58■■□□□ 1.85
CCM2-211ENST00000478582 H3BM21 787 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 H7C0S8 307 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 GAPDHSO14556 408 aaPredicted RBP26.57■■□□□ 1.84
CCM2-211ENST00000478582 DNALI1O14645 258 aaPredicted RBP26.57■■□□□ 1.84
CCM2-211ENST00000478582 TMEM63AO94886 807 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 FTH1P19P0C7X4 201 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 SPINK2P20155 84 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 XIAPP98170 497 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 C2orf54Q08AI8 447 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 BNIP3Q12983 259 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 ZNF542PQ5EBM4 170 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 RNASEH2BQ5TBB1 312 aaKnown RBP26.57■■□□□ 1.84
CCM2-211ENST00000478582 ARMC3Q5W041 872 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 NLRP9Q7RTR0 991 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 MAATS1Q7Z4T9 603 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 GATAD2AQ86YP4 633 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 IL22Q9GZX6 179 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 BFARQ9NZS9 450 aa26.57■■□□□ 1.84
CCM2-211ENST00000478582 TPRP12270 2363 aaKnown RBP26.57■■□□□ 1.84
CCM2-211ENST00000478582 FAM187AA6NFU0 413 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 INPP4BO15327 924 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 HYAL3O43820 417 aaPredicted RBP26.56■■□□□ 1.84
CCM2-211ENST00000478582 PIAS2O75928 621 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 RASGRP1O95267 797 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 CEACAM5P06731 702 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 JUNDP17535 347 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 HK3P52790 923 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 TERF1P54274 439 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 SEPT6Q14141 434 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 CHRNA6Q15825 494 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 SKIDA1Q1XH10 827 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 ATP13A5Q4VNC0 1218 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 PCID2Q5JVF3 399 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 FAM151BQ6UXP7 276 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 CAND1Q86VP6 1230 aaKnown RBP26.56■■□□□ 1.84
CCM2-211ENST00000478582 HOOK3Q86VS8 718 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 PHACTR4Q8IZ21 702 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 OR1E3Q8WZA6 343 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 PEX13Q92968 403 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 GLYATL1Q969I3 302 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 TSACCQ96A04 125 aaPredicted RBP26.56■■□□□ 1.84
CCM2-211ENST00000478582 SCARF2Q96GP6 870 aaPredicted RBP26.56■■□□□ 1.84
CCM2-211ENST00000478582 XAB2Q9HCS7 855 aaKnown RBP26.56■■□□□ 1.84
CCM2-211ENST00000478582 FGF22Q9HCT0 170 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 FKBPLQ9UIM3 349 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 TMPRSS11EQ9UL52 423 aa26.56■■□□□ 1.84
CCM2-211ENST00000478582 SESN2P58004 480 aaPredicted RBP26.55■■□□□ 1.84
CCM2-211ENST00000478582 ITGA9Q13797 1035 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 RAB44Q7Z6P3 723 aaPredicted RBP26.55■■□□□ 1.84
CCM2-211ENST00000478582 SLCO6A1Q86UG4 719 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 CHCHD4Q8N4Q1 142 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 ADAMTS14Q8WXS8 1223 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 DNAJC1Q96KC8 554 aaKnown RBP26.55■■□□□ 1.84
CCM2-211ENST00000478582 TRIM51Q9BSJ1 452 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 SLC13A1Q9BZW2 595 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 VPS18Q9P253 973 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 TCAF1Q9Y4C2 921 aa26.55■■□□□ 1.84
CCM2-211ENST00000478582 PRSS38A1L453 326 aa26.54■■□□□ 1.84
CCM2-211ENST00000478582 AGAP14A8MT82 685 aa26.54■■□□□ 1.84
CCM2-211ENST00000478582 TNFSF14O43557 240 aa26.54■■□□□ 1.84
CCM2-211ENST00000478582 SLC25A14O95258 325 aaPredicted RBP26.54■■□□□ 1.84
CCM2-211ENST00000478582 TNFP01375 233 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms