RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ZNF648Q5T619 568 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 KANSL1Q7Z3B3 1105 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 LINC00523Q86TU6 105 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 KLHL7Q8IXQ5 586 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 SLC25A45Q8N413 288 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 OR4K2Q8NGD2 314 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 OR13C4Q8NGS5 318 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 GDAP1Q8TB36 358 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PTCD2Q8WV60 388 aaKnown RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 RAD18Q9NS91 495 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 IL17CQ9P0M4 197 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 SPASTQ9UBP0 616 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 SUFUQ9UMX1 484 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 DOLKQ9UPQ8 538 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 OAS3Q9Y6K5 1087 aaKnown RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 LAMA5O15230 3695 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 IGF2RP11717 2491 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 GLYATL1P3A0A0U1RQE8 302 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 NEMP2A6NFY4 417 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 TRIM38O00635 465 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 SIGLEC6O43699 453 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CBFA2T3O75081 653 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 MTX2O75431 263 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 SLC25A14O95258 325 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 PRAMEF1O95521 474 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 ECEL1O95672 775 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 GAS8O95995 478 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 TNFP01375 233 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CEACAM5P06731 702 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 HOXC4P09017 264 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 ALPPL2P10696 532 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CEACAM1P13688 526 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CSRP1P21291 193 aaKnown RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 LPOP22079 712 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 TEAD1P28347 426 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 PAFAH1B1P43034 410 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 FNTAP49354 379 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF140P52738 457 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 ETF1P62495 437 aaKnown RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 DNAJC3Q13217 504 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 ELOCQ15369 112 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CYP1B1Q16678 543 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 ATP13A5Q4VNC0 1218 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CREG2Q8IUH2 290 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 PHYKPLQ8IUZ5 450 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 KLHDC8BQ8IXV7 354 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 TRAM1L1Q8N609 369 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 BRSK1Q8TDC3 778 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 GRK7Q8WTQ7 553 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 DNAJC1Q96KC8 554 aaKnown RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CNDP2Q96KP4 475 aaKnown RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 PLEKHG4BQ96PX9 1271 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 FRMD8Q9BZ67 464 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 TMEM168Q9H0V1 697 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CDH19Q9H159 772 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 OR2AG1Q9H205 316 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 IL26Q9NPH9 171 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 SIRPGQ9P1W8 387 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-215ENST00000478531 PRKAB1Q9Y478 270 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 CELSR3Q9NYQ7 3312 aa6.84□□□□□ -1.31
BRCA1-215ENST00000478531 TNFRSF10CO14798 259 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A9O60656 530 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 SUN1O94901 812 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 LDOC1O95751 146 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-215ENST00000478531 ANXA6P08133 673 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 MYF5P13349 255 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A6P19224 532 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A1P22309 533 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A4P22310 534 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A3P35503 534 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A5P35504 534 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 SESN2P58004 480 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CRADDP78560 199 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 DAB2P98082 770 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 PDE1BQ01064 536 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CHRNA6Q15825 494 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 PLA2G4EQ3MJ16 856 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CERCAMQ5T4B2 595 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 ZDHHC20Q5W0Z9 365 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CRTC3Q6UUV7 619 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 C4orf22Q6V702 233 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 DBX2Q6ZNG2 339 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 MICALCLQ6ZW33 695 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 TAF8Q7Z7C8 310 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 GALNT13Q8IUC8 556 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 FSTL5Q8N475 847 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-215ENST00000478531 PNPLA1Q8N8W4 532 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 OR4C6Q8NH72 309 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CCL4L1Q8NHW4 92 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 BAHD1Q8TBE0 780 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-215ENST00000478531 GLYATL1Q969I3 302 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 COX14Q96I36 57 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CDC6Q99741 560 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CLPBQ9H078 707 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A7Q9HAW7 530 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 UGT1A10Q9HAW8 530 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms