RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 CCNKO75909 580 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SNAPC5O75971 98 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 NDST3O95803 873 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ECDO95905 644 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ERBB2P04626 1255 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ITGAVP06756 1048 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PGK2P07205 417 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CAPN1P07384 714 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 BPGMP07738 259 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 KRT7P08729 469 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 COX4I1P13073 169 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 KRT10P13645 584 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CHRNB2P17787 502 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SLC9A1P19634 815 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 BGNP21810 368 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 IL10P22301 178 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 RRM1P23921 792 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PTX3P26022 381 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 GSTM2P28161 218 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ERP29P30040 261 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PRKAR1BP31321 381 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CRHR1P34998 444 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 TALDO1P37837 337 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 GP5P40197 560 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 OR3A3P47888 321 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 KCNJ1P48048 391 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CPA2P48052 419 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 NUMBP49757 651 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CLK3P49761 638 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 GABARAPL2P60520 117 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SNRPFP62306 86 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 DYNLL1P63167 89 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 MRPS15P82914 257 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SLC25A3Q00325 362 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF45Q02386 682 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 GAD2Q05329 585 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 BST1Q10588 318 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 BNIP2Q12982 314 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 KLF1Q13351 362 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PICALMQ13492 652 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 MESDQ14696 234 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 RAB39AQ14964 217 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ACAP1Q15027 740 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SHROOM1Q2M3G4 852 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SMU1Q2TAY7 513 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 LRIT3Q3SXY7 679 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ZFP69Q49AA0 526 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PIGGQ5H8A4 983 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 NHSL2Q5HYW2 709 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 FAM47AQ5JRC9 791 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF484Q5JVG2 852 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 C12orf60Q5U649 245 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 LRRC38Q5VT99 294 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 GPR107Q5VW38 600 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 RSBN1Q5VWQ0 802 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 EEF1DP3Q658K8 133 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SLFN13Q68D06 897 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PDPK2PQ6A1A2 396 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 TIGD3Q6B0B8 471 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 NEK5Q6P3R8 708 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SHQ1Q6PI26 577 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 MAMDC4Q6UXC1 1216 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ETV3LQ6ZN32 361 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 UNC5AQ6ZN44 842 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ZBTB49Q6ZSB9 765 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 RFX8Q6ZV50 586 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SH2D5Q6ZV89 423 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SPATC1Q76KD6 591 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 BEND5Q7L4P6 421 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ADAT2Q7Z6V5 191 aaKnown RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ADGRA1Q86SQ6 560 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SLC26A11Q86WA9 606 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CIR1Q86X95 450 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF677Q86XU0 584 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 HPS6Q86YV9 775 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ARHGEF19Q8IW93 802 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 RHOT1Q8IXI2 618 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PPIL6Q8IXY8 311 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 KATNAL2Q8IYT4 538 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PDIK1LQ8N165 341 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PPM1KQ8N3J5 372 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 TCAIMQ8N3R3 496 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 LCORLQ8N3X6 602 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 PAF1Q8N7H5 531 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ABHD11Q8NFV4 315 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SETD6Q8TBK2 473 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF564Q8TBZ8 553 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 MCOLN3Q8TDD5 553 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 DCAKDQ8WVC6 231 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ANKRD49Q8WVL7 239 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 HSPH1Q92598 858 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 NKD2Q969F2 451 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-212ENST00000477520 TTC17Q96AE7 1141 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 TMIGD2Q96BF3 282 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 FAM149B1Q96BN6 582 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 DNAJC19Q96DA6 116 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 ERLEC1Q96DZ1 483 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 VCPIP1Q96JH7 1222 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 SLC45A3Q96JT2 553 aa4.71□□□□□ -1.66
PTCD3-212ENST00000477520 CLPTM1LQ96KA5 538 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms