RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 B3GALT1Q9Y5Z6 326 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 OAS3Q9Y6K5 1087 aaKnown RBP11.28□□□□□ -0.6
HDLBP-236ENST00000477477 SPTA1P02549 2419 aa11.28□□□□□ -0.6
HDLBP-236ENST00000477477 TRBV23OR9-2A0A075B6M9 112 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 C1orf232A0A0U1RR37 186 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 FADS2P1A8MWK0 482 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 B4E171 279 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 DUX1O43812 170 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 PROSCO94903 275 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 GYPCP04921 128 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 ATP1A1P05023 1023 aaKnown RBP11.27□□□□□ -0.61
HDLBP-236ENST00000477477 ITGB6P18564 788 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 MX2P20592 715 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 TSPAN7P41732 249 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 SPINT3P49223 89 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 TAS2R40P59535 323 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 CYP4F2P78329 520 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-236ENST00000477477 TBR1Q16650 682 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 QPCTQ16769 361 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 HENMT1Q5T8I9 393 aaKnown RBP11.27□□□□□ -0.61
HDLBP-236ENST00000477477 FAM129CQ86XR2 697 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 CCDC13Q8IYE1 715 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 PQLC3Q8N755 202 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 OR10G6Q8NH81 332 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 CPLX3Q8WVH0 158 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 AHCYL2Q96HN2 611 aaKnown RBP11.27□□□□□ -0.61
HDLBP-236ENST00000477477 SLC38A3Q99624 504 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 ZMYND15Q9H091 742 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 CLMPQ9H6B4 373 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 OCIAD1Q9NX40 245 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 SLC39A1Q9NY26 324 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 DTLQ9NZJ0 730 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 TBC1D29Q9UFV1 150 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 ZNHIT2Q9UHR6 403 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 KCNK6Q9Y257 313 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
HDLBP-236ENST00000477477 PRKAB1Q9Y478 270 aa11.27□□□□□ -0.61
HDLBP-236ENST00000477477 TLN1Q9Y490 2541 aaKnown RBP11.26□□□□□ -0.61
HDLBP-236ENST00000477477 SYCE3A1L190 88 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 RGSL1A5PLK6 1076 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 A6NCN8 305 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 EFCAB7A8K855 629 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 WISP1O95388 367 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 MMP2P08253 660 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 KRT7P08729 469 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 SFTPCP11686 197 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 UGT1A3P35503 534 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 CD86P42081 329 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 RAB15P59190 212 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 HHEXQ03014 270 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 CHST15Q7LFX5 561 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-236ENST00000477477 BMPERQ8N8U9 685 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 CCNYQ8ND76 341 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 HERPUD2Q9BSE4 406 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 MLPHQ9BV36 600 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-236ENST00000477477 SLC12A9Q9BXP2 914 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 ASPSCR1Q9BZE9 553 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 FAM83DQ9H4H8 585 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 STN1Q9H668 368 aaKnown RBP11.26□□□□□ -0.61
HDLBP-236ENST00000477477 RMI1Q9H9A7 625 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 SARS2Q9NP81 518 aaKnown RBP11.26□□□□□ -0.61
HDLBP-236ENST00000477477 PKD2L2Q9NZM6 624 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 LCMT1Q9UIC8 334 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 MYO18BQ8IUG5 2567 aa11.26□□□□□ -0.61
HDLBP-236ENST00000477477 KCNK1O00180 336 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 RAD1O60671 282 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 H2AFZP0C0S5 128 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 ACP5P13686 325 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 SLC2A4P14672 509 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 LIFP15018 202 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 HNRNPH3P31942 346 aaKnown RBP11.25□□□□□ -0.61
HDLBP-236ENST00000477477 MAN1A1P33908 653 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-236ENST00000477477 EPHA4P54764 986 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 NFKB2Q00653 900 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 KCNC4Q03721 635 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 PPIDQ08752 370 aaKnown RBP11.25□□□□□ -0.61
HDLBP-236ENST00000477477 ZBTB17Q13105 803 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 NFATC2Q13469 925 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 CLCA4Q14CN2 919 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 DCAF12Q5T6F0 453 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 ANKS6Q68DC2 871 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 IYDQ6PHW0 289 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 WDR74Q6RFH5 385 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-236ENST00000477477 H2AFVQ71UI9 128 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 ARHGAP22Q7Z5H3 698 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 SLC9B2Q86UD5 537 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 CACNA2D3Q8IZS8 1091 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 IL22RA1Q8N6P7 574 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 CNTD1Q8N815 330 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 CCHCR1Q8TD31 782 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 CTNNBL1Q8WYA6 563 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-236ENST00000477477 RAPGEF5Q92565 580 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 SH3KBP1Q96B97 665 aa11.25□□□□□ -0.61
HDLBP-236ENST00000477477 ZNF830Q96NB3 372 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-236ENST00000477477 RNF157Q96PX1 679 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms