RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 C14orf28Q4W4Y0 310 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 FAM182AQ5T1J6 154 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 RAVER1Q8IY67 606 aaKnown RBP16.11■□□□□ 0.17
COL1A1-205ENST00000476387 NRSN1Q8IZ57 195 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 CCDC112Q8NEF3 446 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 SPATA22Q8NHS9 363 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 GPBAR1Q8TDU6 330 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 SNRNP27Q8WVK2 155 aaKnown RBP16.11■□□□□ 0.17
COL1A1-205ENST00000476387 HTR3CQ8WXA8 447 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 FRMD8Q9BZ67 464 aaPredicted RBP16.11■□□□□ 0.17
COL1A1-205ENST00000476387 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 ABCG8Q9H221 673 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 PMS2P1A4D2B8 440 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 MIF4GDA9UHW6 222 aaKnown RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 B4DGG1 531 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 PLD2O14939 933 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 PMPCBO75439 489 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 TJP3O95049 919 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 MT-CYBP00156 380 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 CEACAM5P06731 702 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 NFKB1P19838 968 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 INHBCP55103 352 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 OTUD4Q01804 1114 aaKnown RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 RHDQ02161 417 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 WASHC5Q12768 1159 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 ADAMTSL4Q6UY14 1074 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 RFLNAQ6ZTI6 216 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 B3GNT8Q7Z7M8 397 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 CDKL3Q8IVW4 592 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 ALG3Q92685 438 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 SCAMP4Q969E2 229 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 TRIB3Q96RU7 358 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 GSDMCQ9BYG8 508 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 DPEP2Q9H4A9 486 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 CARS2Q9HA77 564 aaKnown RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 EPB41L5Q9HCM4 733 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 TRNAU1APQ9NX07 287 aaKnown RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 UBP1Q9NZI7 540 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 FAM153AQ9UHL3 310 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 TRHDEQ9UKU6 1024 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 PCDHGA7Q9Y5G6 932 aa16.1■□□□□ 0.17
COL1A1-205ENST00000476387 HELZ2Q9BYK8 2649 aaKnown RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 GCN1Q92616 2671 aaKnown RBP16.1■□□□□ 0.17
COL1A1-205ENST00000476387 CFAP46Q8IYW2 2715 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ERVH48-1M5A8F1 160 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ARHGAP6O43182 974 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 KRT86O43790 486 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
COL1A1-205ENST00000476387 NDST3O95803 873 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 FTCDO95954 541 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 SLC4A1P02730 911 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ILF3Q12906 894 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL1A1-205ENST00000476387 PEX6Q13608 980 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 DOK6Q6PKX4 331 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 RAB11FIP2Q7L804 512 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 PID1Q7Z2X4 250 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 LYSMD3Q7Z3D4 306 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 SPRED1Q7Z699 444 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 C17orf82Q86X59 251 aaPredicted RBP16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ZNF567Q8N184 647 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 FBXO39Q8N4B4 442 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 CCL4L1Q8NHW4 92 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ACTL9Q8TC94 416 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 TMEM159Q96B96 161 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 TADA1Q96BN2 335 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 WBP1Q96G27 269 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 RIOK2Q9BVS4 552 aaKnown RBP16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ZFYVE1Q9HBF4 777 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 LRIT1Q9P2V4 623 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 RSPH14Q9UHP6 348 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 PACSIN2Q9UNF0 486 aaPredicted RBP16.09■□□□□ 0.17
COL1A1-205ENST00000476387 SLC17A4Q9Y2C5 497 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 RNF215Q9Y6U7 377 aa16.09■□□□□ 0.17
COL1A1-205ENST00000476387 ATMQ13315 3056 aa16.08■□□□□ 0.17
COL1A1-205ENST00000476387 A0A0U1RQJ8 604 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 RGSL1A5PLK6 1076 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 GOLGA6L9A6NEM1 432 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 F5H423 210 aaPredicted RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 NRDCO43847 1150 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 SOD1P00441 154 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 IVLP07476 585 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 PIRTP0C851 137 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 PYGMP11217 842 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 UGT1A5P35504 534 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 GNPDA1P46926 289 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 SPINT3P49223 89 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 EIF3EP60228 445 aaKnown RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 ZFP36L1Q07352 338 aaKnown RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 VAC14Q08AM6 782 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 C19orf57Q0VDD7 668 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF438Q7Z4V0 828 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 NLRP8Q86W28 1048 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 NRROSQ86YC3 692 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 Q8N9G6 341 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms