RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CCDC74BQ96LY2 380 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 SMIM14Q96QK8 99 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 ERGIC2Q96RQ1 377 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 GSDMCQ9BYG8 508 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 CDH19Q9H159 772 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 SUDS3Q9H7L9 328 aaPredicted RBP10.4□□□□□ -0.74
CALD1-217ENST00000475772 SEPT11Q9NVA2 429 aaKnown RBP10.4□□□□□ -0.74
CALD1-217ENST00000475772 ETNK2Q9NVF9 386 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 SLC17A4Q9Y2C5 497 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 PPIL1Q9Y3C6 166 aa10.4□□□□□ -0.74
CALD1-217ENST00000475772 PCYT1BQ9Y5K3 369 aaPredicted RBP10.4□□□□□ -0.74
CALD1-217ENST00000475772 DNMT3AQ9Y6K1 912 aaPredicted RBP10.4□□□□□ -0.74
CALD1-217ENST00000475772 RHPN2P1A8MT19 583 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 STMND1H3BQB6 276 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PDE2AO00408 941 aaPredicted RBP10.39□□□□□ -0.75
CALD1-217ENST00000475772 EML2O95834 649 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 IVLP07476 585 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 THRAP10827 490 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 SFTPCP11686 197 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 LIFP15018 202 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 TCF4P15884 667 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 AMPD1P23109 780 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PSMA2P25787 234 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 IL1R2P27930 398 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 TEAD1P28347 426 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 VIPR1P32241 457 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 GPR3P46089 330 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 GNPDA1P46926 289 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 HCAR3P49019 387 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 AP1S1P61966 158 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 TLE1Q04724 770 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
CALD1-217ENST00000475772 FKBP15Q5T1M5 1219 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 DENND2CQ68D51 928 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 SLC30A9Q6PML9 568 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 RBM43Q6ZSC3 357 aaKnown RBP10.39□□□□□ -0.75
CALD1-217ENST00000475772 SYT9Q86SS6 491 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 TSPAN33Q86UF1 283 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PTRH1Q86Y79 214 aaKnown RBP10.39□□□□□ -0.75
CALD1-217ENST00000475772 BMPERQ8N8U9 685 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 OR4D9Q8NGE8 314 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PIH1D2Q8WWB5 315 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 EDARADDQ8WWZ3 215 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 AGAP2Q99490 1192 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 GSX2Q9BZM3 304 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 SP110Q9HB58 689 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 NOD2Q9HC29 1040 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PHPT1Q9NRX4 125 aaPredicted RBP10.39□□□□□ -0.75
CALD1-217ENST00000475772 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 DONSONQ9NYP3 566 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PDP2Q9P2J9 529 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 PHTF1Q9UMS5 762 aa10.39□□□□□ -0.75
CALD1-217ENST00000475772 TRBV23OR9-2A0A075B6M9 112 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.38□□□□□ -0.75
CALD1-217ENST00000475772 NPIPB15A6NHN6 443 aaPredicted RBP10.38□□□□□ -0.75
CALD1-217ENST00000475772 LGALS16A8MUM7 142 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 TMCO5BA8MYB1 307 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 EIF3CLB5ME19 914 aaKnown RBP10.38□□□□□ -0.75
CALD1-217ENST00000475772 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 DAPK3O43293 454 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 FZD6O60353 706 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 MAFKO60675 156 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 PPFIA2O75334 1257 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 LRCH4O75427 683 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 PDHA1P08559 390 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 EPB42P16452 691 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 RENBPP51606 427 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 MAXP61244 160 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 ILF3Q12906 894 aaKnown RBP eCLIP10.38□□□□□ -0.75
CALD1-217ENST00000475772 TRA2AQ13595 282 aaKnown RBP eCLIP10.38□□□□□ -0.75
CALD1-217ENST00000475772 NCAPHQ15003 741 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 SKIDA1Q1XH10 827 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 PYCR3Q53H96 274 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 PPP6R3Q5H9R7 873 aaPredicted RBP10.38□□□□□ -0.75
CALD1-217ENST00000475772 TMCO4Q5TGY1 634 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 TMEM71Q6P5X7 295 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 ART4Q93070 314 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 SCRN2Q96FV2 425 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 ZNF599Q96NL3 588 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 MCCC1Q96RQ3 725 aaPredicted RBP10.38□□□□□ -0.75
CALD1-217ENST00000475772 NUDCD1Q96RS6 583 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 EIF3CQ99613 913 aaKnown RBP10.38□□□□□ -0.75
CALD1-217ENST00000475772 MGME1Q9BQP7 344 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 ABCG8Q9H221 673 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 ENAMQ9NRM1 1142 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 CD84Q9UIB8 345 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 PILRAQ9UKJ1 303 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 TMEM98Q9Y2Y6 226 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 LRRK2Q5S007 2527 aa10.38□□□□□ -0.75
CALD1-217ENST00000475772 ICE1Q9Y2F5 2266 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 LOC101059948A0A1B0GTJ6 334 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 ANKRD62A6NC57 917 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 PSMD11O00231 422 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 NKX2-8O15522 239 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 DUX1O43812 170 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 RAD1O60671 282 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 SOCS5O75159 536 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 PGLSO95336 258 aa10.37□□□□□ -0.75
CALD1-217ENST00000475772 EPXP11678 715 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms