RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 GALNT18Q6P9A2 607 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SPESP1Q6UW49 350 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SDR16C5Q8N3Y7 309 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 CPSF7Q8N684 471 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 PHF10Q8WUB8 498 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF354BQ96LW1 612 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ALPK1Q96QP1 1244 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 MROQ9BYG7 248 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 PNPLA8Q9NP80 782 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 C12orf4Q9NQ89 552 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 DNAJC28Q9NX36 388 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 MORF4L1Q9UBU8 362 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 TBC1D24Q9ULP9 559 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 hCG_1818297A0A087WSY0 165 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 OR14I1A6ND48 311 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 H0YJX3 145 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 AVILO75366 819 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 NDUFB10O96000 172 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 FGF3P11487 239 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 COX7A2P14406 83 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 NRLP54845 237 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 MLLT10P55197 1068 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SLC10A2Q12908 348 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SELENBP1Q13228 472 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 USP43Q70EL4 1123 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 CRYGNQ8WXF5 182 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF641Q96N77 438 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SORT1Q99523 831 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ATPIF1Q9UII2 106 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 IKZF3Q9UKT9 509 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 KMOO15229 486 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 RAMP2O60895 175 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 URODP06132 367 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 CXCR2P25025 360 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 OLR1P78380 273 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 RAB39AQ14964 217 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 GRTP1Q5TC63 336 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ACOT1Q86TX2 421 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ATCAYQ86WG3 371 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ZC3H7AQ8IWR0 971 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 DSELQ8IZU8 1212 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 GTF3C2Q8WUA4 911 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 DPP3Q9NY33 737 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 IFT52Q9Y366 437 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 CNTRLQ7Z7A1 2325 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 HMX2A2RU54 273 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 TFECO14948 347 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SGTAO43765 313 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SNHG28P0DPA3 235 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 DPP6P42658 865 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 LSM3P62310 102 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 PPP2R2BQ00005 443 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 PPM1LQ5SGD2 360 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ADGRG2Q8IZP9 1017 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 Q8N9G6 341 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 LPCAT1Q8NF37 534 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 SELENOMQ8WWX9 145 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 ZC3H10Q96K80 434 aaKnown RBP11.48□□□□□ -0.57
U2AF1-209ENST00000475639 TBCBQ99426 244 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 FAIM2Q9BWQ8 316 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 EXO5Q9H790 373 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
U2AF1-209ENST00000475639 NOTOA8MTQ0 251 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CFHP08603 1231 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF806P0C7X5 589 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CRHR1P34998 444 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 RPL3P39023 403 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 TNK2Q07912 1038 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 NFATC3Q12968 1075 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 C1orf189Q5VU69 101 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ITIH5Q86UX2 942 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CITED4Q96RK1 184 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 MTG1Q9BT17 334 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 C1QTNF7Q9BXJ2 289 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 NEUROD4Q9HD90 331 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 MTMR4Q9NYA4 1195 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 DNMT3BQ9UBC3 853 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 SLC25A12O75746 678 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 GNAO1P09471 354 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ITGB6P18564 788 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 GRIA3P42263 894 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 MAGEA2P43356 314 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 MAPK9P45984 424 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CDH4P55283 916 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 DPYSQ14117 519 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 COL26A1Q96A83 441 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 DUS2Q9NX74 493 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 FAM155AB1AL88 458 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 HTRA2O43464 458 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 NOS1APO75052 506 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 BCAS2O75934 225 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF37AP17032 561 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 IDUAP35475 653 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 MCCD1P59942 119 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF470Q6ECI4 717 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 RP9Q8TA86 221 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CYP2W1Q8TAV3 490 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms