RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
CCDC93-207ENST00000474006 FAM8A1Q9UBU6 413 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 SLC2A6Q9UGQ3 507 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 ZC3H7BQ9UGR2 993 aaKnown RBP7.57□□□□□ -1.2
CCDC93-207ENST00000474006 RIMKLBQ9ULI2 386 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 FZD4Q9ULV1 537 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 SOX13Q9UN79 622 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 CHMP2BQ9UQN3 213 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 INVSQ9Y283 1065 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 PKP3Q9Y446 797 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
CCDC93-207ENST00000474006 A0A1W2PQU0 124 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 RGSL1A5PLK6 1076 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 FAM86C2PA6NEL3 165 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PRR23AA6NEV1 266 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 LRRC72A6NJI9 287 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 H0Y858 1186 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 CCL22O00626 93 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 TTC4O95801 387 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PAK4O96013 591 aaPredicted RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 SLC4A1P02730 911 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 POLBP06746 335 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 C1SP09871 688 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 ELFN1P0C7U0 828 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 TDGF1P13385 188 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 ZNF30P17039 623 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 BPIP17213 487 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PGAM1P18669 254 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 CD33P20138 364 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PSMA3P25788 255 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 CD6P30203 668 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 ETV3P41162 512 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 SPINT3P49223 89 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PMS2P54278 862 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 ADPRHP54922 357 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 GPX6P59796 221 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 SGCGQ13326 291 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 ACOX1Q15067 660 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 USP39Q53GS9 565 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 SEL1L3Q68CR1 1132 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 EMBQ6PCB8 327 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 Q6ZVL8 140 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 GPR26Q8NDV2 337 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 OR13C4Q8NGS5 318 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 OR13J1Q8NGT2 312 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 CXorf40AQ8TE69 158 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 AENQ8WTP8 325 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 HDAC10Q969S8 669 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 CFAP36Q96G28 342 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 DNAJC1Q96KC8 554 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 TBATAQ96M53 351 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 COQ10AQ96MF6 247 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 SLC17A9Q9BYT1 436 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 FAM83DQ9H4H8 585 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 SUDS3Q9H7L9 328 aaPredicted RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PLAC1Q9HBJ0 212 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 MRM3Q9HC36 420 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 PREBQ9HCU5 417 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 IL26Q9NPH9 171 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 TREX1Q9NSU2 369 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 ZFR2Q9UPR6 939 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 COQ6Q9Y2Z9 468 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.56□□□□□ -1.2
CCDC93-207ENST00000474006 FAM169AQ9Y6X4 670 aa7.56□□□□□ -1.2
CCDC93-207ENST00000474006 CHD5Q8TDI0 1954 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 BDP1A6H8Y1 2624 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 UQCRHLA0A096LP55 91 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 IGHV1OR15-9A0A0B4J2B8 117 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 CCDC163A0A0D9SF12 145 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ZCWPW2A0A1B0GU75 182 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 CCDC162PA2VCL2 907 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 GOLGA8KD6RF30 607 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 GOLGA8TH3BQL2 631 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 PSMD11O00231 422 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 WNT9AO14904 365 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ERLIN1O75477 346 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 TM7SF2O76062 418 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 RECQL5O94762 991 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-207ENST00000474006 USP1O94782 785 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 VAPBO95292 243 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 SEMA4FO95754 770 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 UQCRHP07919 91 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ERVK-10P10266 1014 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 C6P13671 934 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 TSHRP16473 764 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 GM2AP17900 193 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ARNTP27540 789 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 SSTR1P30872 391 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 MAT2AP31153 395 aaKnown RBP7.55□□□□□ -1.2
CCDC93-207ENST00000474006 HADHAP40939 763 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ARCN1P48444 511 aaKnown RBP7.55□□□□□ -1.2
CCDC93-207ENST00000474006 FNTBP49356 437 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ZNF140P52738 457 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-207ENST00000474006 RPS21P63220 83 aaKnown RBP7.55□□□□□ -1.2
CCDC93-207ENST00000474006 XIAPP98170 497 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 CREB5Q02930 508 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 PLAURQ03405 335 aa7.55□□□□□ -1.2
CCDC93-207ENST00000474006 ACVR1Q04771 509 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms