RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PNPLA4P41247 253 aa6□□□□□ -1.45
RTF1-203ENST00000473214 MAGEA1P43355 309 aa6□□□□□ -1.45
RTF1-203ENST00000473214 SLC6A11P48066 632 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ARSEP51690 589 aa6□□□□□ -1.45
RTF1-203ENST00000473214 CLCN4P51793 760 aa6□□□□□ -1.45
RTF1-203ENST00000473214 TIRAPP58753 221 aa6□□□□□ -1.45
RTF1-203ENST00000473214 YBX1P67809 324 aaKnown RBP6□□□□□ -1.45
RTF1-203ENST00000473214 NIPAL4Q0D2K0 466 aa6□□□□□ -1.45
RTF1-203ENST00000473214 SNTB2Q13425 540 aaKnown RBP6□□□□□ -1.45
RTF1-203ENST00000473214 PGM5Q15124 567 aa6□□□□□ -1.45
RTF1-203ENST00000473214 UGP2Q16851 508 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ASTE1Q2TB18 679 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 PCGF3Q3KNV8 242 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ZSCAN23Q3MJ62 389 aa6□□□□□ -1.45
RTF1-203ENST00000473214 IFI44LQ53G44 452 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ZNF569Q5MCW4 686 aa6□□□□□ -1.45
RTF1-203ENST00000473214 C6orf163Q5TEZ5 329 aa6□□□□□ -1.45
RTF1-203ENST00000473214 FAM171A1Q5VUB5 890 aa6□□□□□ -1.45
RTF1-203ENST00000473214 OR6B2Q6IFH4 312 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ZNF813Q6ZN06 617 aa6□□□□□ -1.45
RTF1-203ENST00000473214 Q6ZVL8 140 aa6□□□□□ -1.45
RTF1-203ENST00000473214 GPRIN1Q7Z2K8 1008 aa6□□□□□ -1.45
RTF1-203ENST00000473214 REXO1L1PQ8IX06 675 aa6□□□□□ -1.45
RTF1-203ENST00000473214 Q8N1Y9 231 aa6□□□□□ -1.45
RTF1-203ENST00000473214 NAT16Q8N8M0 369 aa6□□□□□ -1.45
RTF1-203ENST00000473214 BHLHE23Q8NDY6 225 aa6□□□□□ -1.45
RTF1-203ENST00000473214 SLC24A4Q8NFF2 622 aa6□□□□□ -1.45
RTF1-203ENST00000473214 DNAJA4Q8WW22 397 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 CDKL2Q92772 493 aa6□□□□□ -1.45
RTF1-203ENST00000473214 HIST1H2AHQ96KK5 128 aa6□□□□□ -1.45
RTF1-203ENST00000473214 C20orf173Q96LM9 149 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ZNF560Q96MR9 790 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ZNF558Q96NG5 402 aa6□□□□□ -1.45
RTF1-203ENST00000473214 HIST1H2AJQ99878 128 aa6□□□□□ -1.45
RTF1-203ENST00000473214 CDK19Q9BWU1 502 aa6□□□□□ -1.45
RTF1-203ENST00000473214 GLIS2Q9BZE0 524 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 HRH4Q9H3N8 390 aa6□□□□□ -1.45
RTF1-203ENST00000473214 CCDC134Q9H6E4 229 aa6□□□□□ -1.45
RTF1-203ENST00000473214 SYNPO2LQ9H987 977 aa6□□□□□ -1.45
RTF1-203ENST00000473214 AKIRIN1Q9H9L7 192 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 KCNK12Q9HB15 430 aa6□□□□□ -1.45
RTF1-203ENST00000473214 GPN1Q9HCN4 374 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 SIDT1Q9NXL6 827 aaKnown RBP6□□□□□ -1.45
RTF1-203ENST00000473214 OGFRQ9NZT2 677 aa6□□□□□ -1.45
RTF1-203ENST00000473214 PLEKHM1Q9Y4G2 1056 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ACTL7AQ9Y615 435 aa6□□□□□ -1.45
RTF1-203ENST00000473214 PLEKHG2Q9H7P9 1386 aa6□□□□□ -1.45
RTF1-203ENST00000473214 NHSQ6T4R5 1651 aa6□□□□□ -1.45
RTF1-203ENST00000473214 PNPLA7Q6ZV29 1317 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 SPATA31E1Q6ZUB1 1445 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 TULP4Q9NRJ4 1543 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 DHX57Q6P158 1386 aaKnown RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 A0A075B6Q4 140 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 A0A0A6YYC8 382 aaPredicted RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 EDDM13A0A1B0GTR0 161 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 TARSL2A2RTX5 802 aaKnown RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 AQP7P3A6NL99 342 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 SLC38A8A6NNN8 435 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 ZNF716A6NP11 495 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 I3L1I5 382 aaPredicted RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 K7ERQ8 282 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 SNAP23O00161 211 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GRM8O00222 908 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 HGSO14964 777 aaPredicted RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 CLIC2O15247 247 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 PAPSS1O43252 624 aaPredicted RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 PRAMEF4O60810 478 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 NIPSNAP2O75323 286 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GPR32O75388 356 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 OR6B1O95007 311 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 ZNF205O95201 554 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 VNN2O95498 520 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GALTP07902 379 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 ZNF735P0CB33 412 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 PRKCAP17252 672 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 CTPS1P17812 591 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GLDCP23378 1020 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 CD27P26842 260 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 PTPN6P29350 595 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 CPOXP36551 454 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 CAPGP40121 348 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 HAAOP46952 286 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GABRB2P47870 512 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 STARP49675 285 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 EPHA5P54756 1037 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 NAGLUP54802 743 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 MFAP3P55082 362 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 UCP2P55851 309 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 ATP5IP56385 69 aaPredicted RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 TUBA1BP68363 451 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 RPP38P78345 283 aaKnown RBP5.99□□□□□ -1.45
RTF1-203ENST00000473214 TEKQ02763 1124 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GAD2Q05329 585 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 LIPEQ05469 1076 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GOLGA8FQ08AF8 430 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 LCP2Q13094 533 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 PPIGQ13427 754 aaKnown RBP eCLIP5.99□□□□□ -1.452e-7■□□□□ 8.5
RTF1-203ENST00000473214 CSHL1Q14406 222 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 SMTNL2Q2TAL5 461 aa5.99□□□□□ -1.45
RTF1-203ENST00000473214 GAB4Q2WGN9 574 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms