RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SGSM3Q96HU1 749 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 HIC2Q96JB3 615 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 FCRL3Q96P31 734 aaPredicted RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 ZCCHC2Q9C0B9 1178 aaKnown RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 CDC42EP4Q9H3Q1 356 aaKnown RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 SUDS3Q9H7L9 328 aaPredicted RBP16.75■□□□□ 0.27
CCM2-205ENST00000472223 NSMCE4AQ9NXX6 385 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 VPS9D1Q9Y2B5 631 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 ABCA7Q8IZY2 2146 aa16.75■□□□□ 0.27
CCM2-205ENST00000472223 ZCWPW2A0A1B0GU75 182 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 BCAT2O15382 392 aaPredicted RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 CTIFO43310 598 aaKnown RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 FAM153BP0C7A2 387 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 MAOBP27338 520 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 CD38P28907 300 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 SSTR1P30872 391 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 AKT1P31749 480 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 PTGER3P43115 390 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 TTPAP49638 278 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 ARSDP51689 593 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 C21orf59P57076 290 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 OVGP1Q12889 678 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 PEX6Q13608 980 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 GTF2H3Q13889 308 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 FRG1Q14331 258 aaKnown RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 NAA30Q147X3 362 aaPredicted RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 FAM153CQ494X1 144 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 ATP13A5Q4VNC0 1218 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 RNF187Q5TA31 235 aaPredicted RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 ZNF449Q6P9G9 518 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 ADAMTSL4Q6UY14 1074 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 MFSD2AQ8NA29 543 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 BTN2A2Q8WVV5 523 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 UBLCP1Q8WVY7 318 aaPredicted RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 ATOH1Q92858 354 aaPredicted RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 GLYATL1Q969I3 302 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 VPS35Q96QK1 796 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 TCF12Q99081 682 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 KLF6Q99612 283 aaPredicted RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 APOOQ9BUR5 198 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 LRRC4CQ9HCJ2 640 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 MBNL1Q9NR56 388 aaKnown RBP16.74■□□□□ 0.27
CCM2-205ENST00000472223 NINJ2Q9NZG7 142 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 ZFATQ9P243 1243 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 SCN8AQ9UQD0 1980 aa16.74■□□□□ 0.27
CCM2-205ENST00000472223 PLXNA2O75051 1894 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 DOCK9Q9BZ29 2069 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 A0A087WUV0 522 aaPredicted RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 RAD51BO15315 384 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 INPP4BO15327 924 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A9O60656 530 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 NDUFS3O75489 264 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 ACSL3O95573 720 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 ASMTLO95671 621 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 MYBL2P10244 700 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A6P19224 532 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 MSH3P20585 1137 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A1P22309 533 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A4P22310 534 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A3P35503 534 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A5P35504 534 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 IGFALSP35858 605 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 CLDN2P57739 230 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 XIAPP98170 497 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 MGAT5Q09328 741 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 HSP90AA5PQ58FG0 334 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 KYAT3Q6YP21 454 aaKnown RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 Q6ZSR6 202 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 CYS1Q717R9 158 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 IQCHQ86VS3 1027 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 HEATR4Q86WZ0 1026 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 PLA2G15Q8NCC3 412 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 CEP76Q8TAP6 659 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 SCG3Q8WXD2 468 aaKnown RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 PIGKQ92643 395 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 LOXL4Q96JB6 756 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 COPS8Q99627 209 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 TRIM56Q9BRZ2 755 aaKnown RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 FAM96AQ9H5X1 160 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A7Q9HAW7 530 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A10Q9HAW8 530 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 UGT1A8Q9HAW9 530 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 IARS2Q9NSE4 1012 aaKnown RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 SMOXQ9NWM0 555 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 IKBKGQ9Y6K9 419 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 R4GN57 208 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 ZNF106Q9H2Y7 1883 aaKnown RBP16.73■□□□□ 0.27
CCM2-205ENST00000472223 SPAG17Q6Q759 2223 aa16.73■□□□□ 0.27
CCM2-205ENST00000472223 CCDC151A5D8V7 595 aa16.72■□□□□ 0.27
CCM2-205ENST00000472223 OR51F1A6NGY5 319 aa16.72■□□□□ 0.27
CCM2-205ENST00000472223 GOLGA8KD6RF30 607 aa16.72■□□□□ 0.27
CCM2-205ENST00000472223 GOLGA8TH3BQL2 631 aa16.72■□□□□ 0.27
CCM2-205ENST00000472223 HOXC4P09017 264 aaPredicted RBP16.72■□□□□ 0.27
CCM2-205ENST00000472223 THEGLP0DJG4 465 aa16.72■□□□□ 0.27
CCM2-205ENST00000472223 ERVK-10P10266 1014 aa16.72■□□□□ 0.27
CCM2-205ENST00000472223 MYCLP1P12525 358 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms