RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ART1P52961 327 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 GFRA1P56159 465 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 HSD17B7P56937 341 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ERVFRD-1P60508 538 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 RPL11P62913 178 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 AKAP17AQ02040 695 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 CDC20Q12834 499 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TAF10Q12962 218 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PRKG2Q13237 762 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 CUL3Q13618 768 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PFKFB3Q16875 520 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 LONRF2Q1L5Z9 754 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 C5orf22Q49AR2 442 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 KRBOX4Q5JUW0 171 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 RNASEH2BQ5TBB1 312 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 C9orf57Q5W0N0 161 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TMEM198Q66K66 360 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PAQR3Q6TCH7 311 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 KDELC1Q6UW63 502 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 LRRC31Q6UY01 552 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 MAATS1Q7Z4T9 603 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 MILR1Q7Z6M3 343 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 OSTM1Q86WC4 334 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NKAIN4Q8IVV8 208 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 SCUBE1Q8IWY4 988 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PPIL6Q8IXY8 311 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 DCP1BQ8IZD4 617 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 UNC5BQ8IZJ1 945 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NAGSQ8N159 534 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 APOBEC4Q8WW27 367 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 HAS1Q92839 578 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ARL5BQ96KC2 179 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ANKRD27Q96NW4 1050 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 XPO6Q96QU8 1125 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 EIF3CQ99613 913 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 GAL3ST1Q99999 423 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 EIF2AK1Q9BQI3 630 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 LGR4Q9BXB1 951 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 CIPCQ9C0C6 399 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 HAPLN2Q9GZV7 340 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 INTS2Q9H0H0 1204 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 VPS16Q9H269 839 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 CENPHQ9H3R5 247 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ZNF552Q9H707 407 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 C12orf10Q9HB07 376 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TMEM165Q9HC07 324 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 KCNMB3Q9NPA1 279 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PRSS16Q9NQE7 514 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PAPOLBQ9NRJ5 636 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ANKEF1Q9NU02 776 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 SIRT5Q9NXA8 310 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ELOVL2Q9NXB9 296 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 FBXL12Q9NXK8 326 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NLGN3Q9NZ94 848 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 MOCS1Q9NZB8 636 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NDUFA13Q9P0J0 144 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 HECAQ9UBI9 543 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 EXTL2Q9UBQ6 330 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 LAMP5Q9UJQ1 280 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ZNF711Q9Y462 761 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 PCDHGB6Q9Y5F9 930 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ATP6V1DQ9Y5K8 247 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 ABCA4P78363 2273 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TGP01266 2768 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 KMT2CQ8NEZ4 4911 aaKnown RBP4.44□□□□□ -1.7
LMNB1-205ENST00000472034 MXRA5Q9NR99 2828 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 NOTCH1P46531 2555 aa4.44□□□□□ -1.7
LMNB1-205ENST00000472034 TCHHQ07283 1943 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 TTC26A0AVF1 554 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 EME2A4GXA9 379 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 ZNF891A8MT65 544 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 hCG_1984214I3L0E3 225 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 PIRO00625 290 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 NTN3O00634 580 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 SCAMP1O15126 338 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 MID1O15344 667 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 PRODHO43272 600 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 RASA4O43374 803 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 TBX1O43435 398 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 KCNAB3O43448 404 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 SPOPO43791 374 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 DNAJB5O75953 348 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 RNF8O76064 485 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 USP1O94782 785 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 SLU7O95391 586 aaKnown RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 CBX6O95503 412 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 DNTTP04053 509 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 CYBBP04839 570 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 MCF2P10911 925 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 PABPC1P11940 636 aaKnown RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 ATP6V1B1P15313 513 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 CD1EP15812 388 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 ALOX15P16050 662 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 STMN1P16949 149 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 KLK2P20151 261 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 RPS6KB1P23443 525 aa4.43□□□□□ -1.7
LMNB1-205ENST00000472034 LEPRP48357 1165 aaKnown RBP4.43□□□□□ -1.7
LMNB1-205ENST00000472034 ETV1P50549 477 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms