RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 UGT1A10Q9HAW8 530 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 UGT1A8Q9HAW9 530 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 SGK2Q9HBY8 427 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 KCNK9Q9NPC2 374 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 NKIRAS1Q9NYS0 192 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 SMG5Q9UPR3 1016 aaKnown RBP9.71□□□□□ -0.86
CCM2-204ENST00000470837 MTF2Q9Y483 593 aaPredicted RBP9.71□□□□□ -0.86
CCM2-204ENST00000470837 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 PSAT1Q9Y617 370 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 COMMD10Q9Y6G5 202 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 C5orf42Q9H799 3197 aa9.71□□□□□ -0.86
CCM2-204ENST00000470837 FAM95CA0A1B0GW59 222 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 IGLON5A6NGN9 336 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 SHISA7A6NL88 538 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 COPEO14579 308 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 PRMT5O14744 637 aaPredicted RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 PLRG1O43660 514 aaKnown RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 HAUS5O94927 633 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 S1PR4O95977 384 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 C1QAP02745 245 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 ESR1P03372 595 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 MPOP05164 745 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 BRAFP15056 766 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 GABRG2P18507 467 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 KRT4P19013 534 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 UGT1A6P19224 532 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 NR1D1P20393 614 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 MSH3P20585 1137 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 UGT1A1P22309 533 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 UGT1A4P22310 534 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 ACRV1P26436 265 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 CRABP2P29373 138 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 UGT1A3P35503 534 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 UGT1A5P35504 534 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 RPS9P46781 194 aaKnown RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 CCT5P48643 541 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 TPMTP51580 245 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 ADPRHP54922 357 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 XIAPP98170 497 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 POU4F1Q01851 419 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 SIGLEC14Q08ET2 396 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 GTF2H3Q13889 308 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 TTMPQ5BVD1 217 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 LDLRAP1Q5SW96 308 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 PTRHD1Q6GMV3 140 aaKnown RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 FAM45BPQ6NSW5 357 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 UGT3A1Q6NUS8 523 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 TIFABQ6ZNK6 161 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 TECPR1Q7Z6L1 1165 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 LDB1Q86U70 411 aaPredicted RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 TRABD2AQ86V40 505 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 SERPINA9Q86WD7 417 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 PHYKPLQ8IUZ5 450 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 NXPE1Q8N323 547 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 DCLK2Q8N568 766 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 FAM45AQ8TCE6 357 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 ACMSDQ8TDX5 336 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 COQ10AQ96MF6 247 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 HHIPQ96QV1 700 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 GPR22Q99680 433 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 SLC6A17Q9H1V8 727 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 CNOT10Q9H9A5 744 aaKnown RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 ZDHHC3Q9NYG2 299 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 OGFRQ9NZT2 677 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 MARCH4Q9P2E8 410 aaPredicted RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 NFKBIL1Q9UBC1 381 aaPredicted RBP9.7□□□□□ -0.86
CCM2-204ENST00000470837 GNPTGQ9UJJ9 305 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 CRYL1Q9Y2S2 319 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 COQ6Q9Y2Z9 468 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 VWA7Q9Y334 891 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 F5P12259 2224 aa9.7□□□□□ -0.86
CCM2-204ENST00000470837 A0A1W2PQU0 124 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 H3BQF6 201 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 QSOX1O00391 747 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 TPP1O14773 563 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 DCXO43602 365 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 NDUFS2O75306 463 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 VPS26AO75436 327 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 RHOBTB1O94844 696 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 SLC25A14O95258 325 aaPredicted RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 OR56A5P0C7T3 313 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 PYGBP11216 843 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 CHRM3P20309 590 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 FMO4P31512 558 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 NSG1P42857 185 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 CXCL12P48061 93 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 CCR3P51677 355 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 KPNA2P52292 529 aaKnown RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 PPP2R2AP63151 447 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 PDAP1Q13442 181 aaKnown RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 ITIH4Q14624 930 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 LRRC14Q15048 493 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 DBN1Q16643 649 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 MAP7D1Q3KQU3 841 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 ATP13A5Q4VNC0 1218 aa9.69□□□□□ -0.86
CCM2-204ENST00000470837 HENMT1Q5T8I9 393 aaKnown RBP9.69□□□□□ -0.86
CCM2-204ENST00000470837 PSAPL1Q6NUJ1 521 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms