RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 USP41Q3LFD5 358 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 CLLU1OSQ5K130 101 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 RARS2Q5T160 578 aaKnown RBP16.48■□□□□ 0.23
HOXB3-205ENST00000470495 VASH1Q7L8A9 365 aaPredicted RBP16.48■□□□□ 0.23
HOXB3-205ENST00000470495 CNTD1Q8N815 330 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 CATSPER1Q8NEC5 780 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 ZSCAN18Q8TBC5 510 aaPredicted RBP16.48■□□□□ 0.23
HOXB3-205ENST00000470495 TMEM79Q9BSE2 394 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 SLC25A51Q9H1U9 297 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 LIN28AQ9H9Z2 209 aaKnown RBP16.48■□□□□ 0.23
HOXB3-205ENST00000470495 TAS2R1Q9NYW7 299 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 HCSTQ9UBK5 93 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 GPSM3Q9Y4H4 160 aa16.48■□□□□ 0.23
HOXB3-205ENST00000470495 ARVCFO00192 962 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 TACR2P21452 398 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 ACVRL1P37023 503 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 SLC1A2P43004 574 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 CHN2P52757 468 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 GALNTL6Q49A17 601 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 LRRC8EQ6NSJ5 796 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 CNSTQ6PJW8 725 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 EGFL8Q99944 293 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 TDRD1Q9BXT4 1180 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 PLA2G4CQ9UP65 541 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 F8W8V4 182 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 PSMG1O95456 288 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 CRTAMO95727 393 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 AHSGP02765 367 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 CHRNGP07510 517 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 RBP1P09455 135 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 ETV4P43268 484 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 PLOD1Q02809 727 aaPredicted RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 YME1L1Q96TA2 773 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 TM6SF2Q9BZW4 377 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 TMEM39AQ9NV64 488 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 RSL24D1Q9UHA3 163 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 H0YJX3 145 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 PABPC1P11940 636 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 TFEBP19484 476 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 HNRNPDQ14103 355 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 LIPMQ5VYY2 423 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 ARID2Q68CP9 1835 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 FSTL5Q8N475 847 aaPredicted RBP16.47■□□□□ 0.23
HOXB3-205ENST00000470495 GKN1Q9NS71 199 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 SACM1LQ9NTJ5 587 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 TOR4AQ9NXH8 423 aa16.47■□□□□ 0.23
HOXB3-205ENST00000470495 UBE3AQ05086 875 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 TSTA3Q13630 321 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ARL13AQ5H913 290 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 OTUD1Q5VV17 481 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 CRTC1Q6UUV9 634 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 LINGO4Q6UY18 593 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 SCD5Q86SK9 330 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 SLC35B4Q969S0 331 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 CDADC1Q9BWV3 514 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 SAV1Q9H4B6 383 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 RNF112Q9ULX5 631 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 LRRC42Q9Y546 428 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ASB3Q9Y575 518 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 USP3Q9Y6I4 520 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 NEMP2A6NFY4 417 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 FKTNO75072 461 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 XPAP23025 273 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 DSC3Q14574 896 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 TRIP4Q15650 581 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 MS4A13Q5J8X5 152 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 SPARTQ8N0X7 666 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ELMOD1Q8N336 334 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ZFRQ96KR1 1074 aaKnown RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 RTP3Q9BQQ7 232 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.23
HOXB3-205ENST00000470495 CD274Q9NZQ7 290 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 PDZK1P1A8MUH7 402 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 FAM25AB3EWG3 89 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 FAM25CB3EWG5 89 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 FAM25GB3EWG6 89 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 J3QRK9 145 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 THRAP10827 490 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ZNF3P17036 446 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ITGB6P18564 788 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 IL12RB1P42701 662 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 MAGEA6P43360 314 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 PXDC1Q5TGL8 231 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 PM20D1Q6GTS8 502 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 ADCK1Q86TW2 530 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 HTRA1Q92743 480 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 NCLNQ969V3 563 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 FBXL8Q96CD0 374 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 BBS2Q9BXC9 721 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 CDH19Q9H159 772 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 RUBCNLQ9H714 662 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 PLK2Q9NYY3 685 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 SIRPGQ9P1W8 387 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 SCML2Q9UQR0 700 aa16.46■□□□□ 0.23
HOXB3-205ENST00000470495 PKP3Q9Y446 797 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms