RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SAFBQ15424 915 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS8-219ENST00000469479 NPY5RQ15761 445 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 KRTAP21-3Q3LHN1 58 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 FUT11Q495W5 492 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ZC2HC1CQ53FD0 456 aaPredicted RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 SLC45A4Q5BKX6 768 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 C9orf57Q5W0N0 161 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 EGFLAMQ63HQ2 1017 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 KIAA1161Q6NSJ0 714 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 PIK3AP1Q6ZUJ8 805 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 DENND5BQ6ZUT9 1274 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ZNF551Q7Z340 670 aaPredicted RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 NOP9Q86U38 636 aaKnown RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 CATSPER3Q86XQ3 398 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 SFTPA1Q8IWL2 248 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 OVCA2Q8WZ82 227 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 USP7Q93009 1102 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 TCEANC2Q96MN5 208 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 CCNL2Q96S94 520 aaPredicted RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 PYM1Q9BRP8 204 aaKnown RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 KIFC3Q9BVG8 833 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 AGXT2Q9BYV1 514 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 ERVMER34-1Q9H9K5 563 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 GDF3Q9NR23 364 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 DNAJC17Q9NVM6 304 aaKnown RBP4.9□□□□□ -1.63
VPS8-219ENST00000469479 SH3BP4Q9P0V3 963 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 MAN2B2Q9Y2E5 1009 aa4.9□□□□□ -1.63
VPS8-219ENST00000469479 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 OTOGQ6ZRI0 2925 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ZNF840PA6NDX5 716 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 LACTBL1A8MY62 500 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 KCNU1A8MYU2 1149 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 TIMM44O43615 452 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 MAGEC1O60732 1142 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 HUS1O60921 280 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SEMA4FO95754 770 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 MT-CO3P00414 261 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 OAS1P00973 400 aaKnown RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 GP1BAP07359 652 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 OR52Z1P0C646 297 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 MBL2P11226 248 aaPredicted RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 NDUFB7P17568 137 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 CYP2F1P24903 491 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ELAVL4P26378 380 aaKnown RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 PSMA5P28066 241 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 EPHA8P29322 1005 aaPredicted RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 CDC25AP30304 524 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 WASP42768 502 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SLC5A3P53794 718 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 POU6F2P78424 691 aaPredicted RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 TLE1Q04724 770 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ST3GAL1Q11201 340 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ENPP2Q13822 863 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 PDIA5Q14554 519 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ARL13BQ3SXY8 428 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 TTC31Q49AM3 519 aaPredicted RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 WSCD1Q658N2 575 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 BLOC1S2Q6QNY1 142 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SCN4BQ8IWT1 228 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 CFAP52Q8N1V2 620 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ARL14Q8N4G2 192 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SPATA20Q8TB22 786 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SAP25Q8TEE9 199 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 LRRC15Q8TF66 581 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 NSMCE1Q8WV22 266 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 GOLGA1Q92805 767 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 REPS1Q96D71 796 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SGF29Q96ES7 293 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 BICD1Q96G01 975 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 RAB34Q9BZG1 259 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 BTBD1Q9H0C5 482 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ADNPQ9H2P0 1102 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 PIF1Q9H611 641 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 USP29Q9HBJ7 922 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SGK2Q9HBY8 427 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 ASCL3Q9NQ33 180 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 NCKIPSDQ9NZQ3 722 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 KCND2Q9NZV8 630 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 LARSQ9P2J5 1176 aaKnown RBP4.89□□□□□ -1.63
VPS8-219ENST00000469479 SCML1Q9UN30 329 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 PLAAQ9Y263 795 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 SLC27A6Q9Y2P4 619 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS8-219ENST00000469479 STON1Q9Y6Q2 735 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 CABIN1Q9Y6J0 2220 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 POLQO75417 2590 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 CELSR2Q9HCU4 2923 aa4.89□□□□□ -1.63
VPS8-219ENST00000469479 HELZP42694 1942 aaKnown RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 A0A0B4J269 797 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 HNRNPDLO14979 420 aaKnown RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 TSPAN3O60637 253 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 MED24O75448 989 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 RTN3O95197 1032 aaPredicted RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 IL18RAPO95256 599 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 PIGRP01833 764 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 ALPPL2P10696 532 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 MYF5P13349 255 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 TYRP14679 529 aa4.88□□□□□ -1.63
VPS8-219ENST00000469479 PDIA3P30101 505 aaKnown RBP4.88□□□□□ -1.63
VPS8-219ENST00000469479 SLC6A4P31645 630 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms