RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 SNAP91O60641 907 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 FKBP6O75344 327 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TM7SF2O76062 418 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 MT-CO1P00395 513 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 SERPINF2P08697 491 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TPP2P29144 1249 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 EEF1DP29692 281 aaKnown RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 NBL1P41271 181 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 GLRBP48167 497 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 STK19P49842 368 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TPMTP51580 245 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF143P52747 638 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 CRADDP78560 199 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 ITGA9Q13797 1035 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 NRF1Q16656 503 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 KIF19Q2TAC6 998 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TMEM164Q5U3C3 297 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 ANKRD22Q5VYY1 191 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 NCEH1Q6PIU2 408 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 USP45Q70EL2 814 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 OR6Y1Q8NGX8 325 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 DCUN1D1Q96GG9 259 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 CCDC138Q96M89 665 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 KLHL32Q96NJ5 620 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 LRRC3BQ96PB8 259 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TRAPPC9Q96Q05 1148 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 HAPLN3Q96S86 360 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 SIKE1Q9BRV8 207 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 HAUS8Q9BT25 410 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 OSGEPL1Q9H4B0 414 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 COPS7BQ9H9Q2 264 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 NT5MQ9NPB1 228 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PHPT1Q9NRX4 125 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TM7SF3Q9NS93 570 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PAIP2BQ9ULR5 123 aaKnown RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 FCF1Q9Y324 198 aaKnown RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 V9GYQ6 96 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 A0A0C4DFX4 3053 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 A0A1W2PQU0 124 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 AKT1P31749 480 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PPARGP37231 505 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 STX1BP61266 288 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 MGAT5Q09328 741 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF252P-AS1Q0IIN9 211 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TCF15Q12870 199 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PDK1Q15118 436 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PDK3Q15120 406 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PARP15Q460N3 678 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 N4BP2L1Q5TBK1 243 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 PDPK2PQ6A1A2 396 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 DOK6Q6PKX4 331 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 DCAF4L2Q8NA75 395 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 GABPB2Q8TAK5 448 aaPredicted RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 C10orf82Q8WW14 230 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 MRGPRX1Q96LB2 322 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 TUBGCP5Q96RT8 1024 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 FEM1AQ9BSK4 669 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 WRAP53Q9BUR4 548 aaKnown RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 ADGRE3Q9BY15 652 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 FAM192AQ9GZU8 254 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 SEMA6AQ9H2E6 1030 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 DPEP2Q9H4A9 486 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 CCDC134Q9H6E4 229 aa5.98□□□□□ -1.45
SHQ1-205ENST00000468371 STX18Q9P2W9 335 aaKnown RBP5.98□□□□□ -1.45
SHQ1-205ENST00000468371 A0A1B0GVG6 124 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 CAPN8A6NHC0 703 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PDZK1P1A8MUH7 402 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RRP8O43159 456 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 VNN2O95498 520 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LDOC1O95751 146 aaPredicted RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 KLKB1P03952 638 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ENGP17813 658 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RBMS1P29558 406 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HLA-FP30511 346 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PTGER3P43115 390 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 GRK6P43250 576 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MAPK9P45984 424 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 AIF1P55008 147 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HDAC4P56524 1084 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 HNRNPKP61978 463 aaKnown RBP eCLIP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PPIDQ08752 370 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 C16orf72Q14CZ0 275 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 LIN52Q52LA3 116 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 FNBP1LQ5T0N5 605 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 DPY19L2P1Q6NXN4 242 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 ERN2Q76MJ5 926 aaKnown RBP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 XYLT1Q86Y38 959 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 KATNAL2Q8IYT4 538 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 NETO2Q8NC67 525 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PHF12Q96QT6 1004 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PHACTR1Q9C0D0 580 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 EPB41L4BQ9H329 900 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 MTG2Q9H4K7 406 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 RBM22Q9NW64 420 aaKnown RBP eCLIP5.97□□□□□ -1.45
SHQ1-205ENST00000468371 OSER1Q9NX31 292 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PAK5Q9P286 719 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 FAM8A1Q9UBU6 413 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 SLC27A6Q9Y2P4 619 aa5.97□□□□□ -1.45
SHQ1-205ENST00000468371 PCDHB11Q9Y5F2 797 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms