RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ZNF398Q8TD17 642 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 GLYATL1Q969I3 302 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 ULK4Q96C45 1275 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CFAP36Q96G28 342 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 KLHDC7BQ96G42 594 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 HIC2Q96JB3 615 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 FCRL3Q96P31 734 aaPredicted RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 AGAP2Q99490 1192 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 WDR83Q9BRX9 315 aaKnown RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 TRIM56Q9BRZ2 755 aaKnown RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 APOOQ9BUR5 198 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 TEX101Q9BY14 249 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 ASB8Q9H765 288 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 SUDS3Q9H7L9 328 aaPredicted RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 PHPT1Q9NRX4 125 aaPredicted RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 SMOXQ9NWM0 555 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CA5BQ9Y2D0 317 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 FAM169AQ9Y6X4 670 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 ATXN2Q99700 1313 aaKnown RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 A0A1W2PR77 199 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 H0Y8X5 98 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 VILLO15195 856 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 GOT2P00505 430 aaKnown RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 HOXC4P09017 264 aaPredicted RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 GSTA2P09210 222 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 MYCLP1P12525 358 aaPredicted RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 KELP23276 732 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 HTR1BP28222 390 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 THOP1P52888 689 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 PTK2BQ14289 1009 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 FRG1Q14331 258 aaKnown RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 ATP13A5Q4VNC0 1218 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 ZRANB3Q5FWF4 1079 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 AARS2Q5JTZ9 985 aaKnown RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 CCNI2Q6ZMN8 369 aaPredicted RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 UNC5AQ6ZN44 842 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 Q6ZSR6 202 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 DCP2Q8IU60 420 aaKnown RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 PHYKPLQ8IUZ5 450 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 GABPB2Q8TAK5 448 aaPredicted RBP15.1■□□□□ 0.01
SNIP1-202ENST00000468040 GSDMBQ8TAX9 411 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 BTN2A2Q8WVV5 523 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 TTC1Q99614 292 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 CRLS1Q9UJA2 301 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 OR1A2Q9Y585 309 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 SLCO1B1Q9Y6L6 691 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 DOCK9Q9BZ29 2069 aa15.1■□□□□ 0.01
SNIP1-202ENST00000468040 AGAP14A8MT82 685 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 INPP4BO15327 924 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 SPAG6O75602 509 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 SLC25A14O95258 325 aaPredicted RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 THEGLP0DJG4 465 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 ARNTP27540 789 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 FOXN2P32314 431 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 PPARGP37231 505 aaPredicted RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 ARCN1P48444 511 aaKnown RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 KIAA1024LP59773 190 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 VSNL1P62760 191 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 THOC5Q13769 683 aaKnown RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 NFATC4Q14934 902 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 DUOXA1Q1HG43 343 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 FASTKD1Q53R41 847 aaKnown RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 LDLRAP1Q5SW96 308 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 LYPLAL1Q5VWZ2 237 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 MRNIPQ6NTE8 343 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 CERS6Q6ZMG9 384 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 LMNTD2Q8IXW0 634 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 SUMF1Q8NBK3 374 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 OR13H1Q8NG92 308 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 CALML6Q8TD86 181 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 FUBP1Q96AE4 644 aaKnown RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 COX14Q96I36 57 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 C9orf72Q96LT7 481 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 TTC25Q96NG3 672 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 ZCCHC2Q9C0B9 1178 aaKnown RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 GPR27Q9NS67 375 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 CATSPERZQ9NTU4 200 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 C20orf96Q9NUD7 363 aaPredicted RBP15.09■□□□□ 0.01
SNIP1-202ENST00000468040 TMEM74BQ9NUR3 256 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 GMEB2Q9UKD1 530 aa15.09■□□□□ 0.01
SNIP1-202ENST00000468040 TRBV5-4A0A0C4DH59 114 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 OR51F1A6NGY5 319 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 TLR4O00206 839 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 CD3EAPO15446 510 aaKnown RBP15.08■□□□□ 0
SNIP1-202ENST00000468040 GPR39O43194 453 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 UGT1A9O60656 530 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 RETP07949 1114 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 UGT1A6P19224 532 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 UGT1A1P22309 533 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 UGT1A4P22310 534 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 UGT1A3P35503 534 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 UGT1A5P35504 534 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 MPLP40238 635 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 C21orf59P57076 290 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 PDE1CQ14123 709 aaPredicted RBP15.08■□□□□ 0
SNIP1-202ENST00000468040 NEPROQ6NW34 567 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 KDM7AQ6ZMT4 941 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 MACC1Q6ZN28 852 aa15.08■□□□□ 0
SNIP1-202ENST00000468040 C3orf62Q6ZUJ4 267 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms