RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TNNI1P19237 187 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 CCKBRP32239 447 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 LONP1P36776 959 aaKnown RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 STAT5AP42229 794 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 RECQLP46063 649 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 AP3M2P53677 418 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 POLE2P56282 527 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 GEMIN4P57678 1058 aaKnown RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SNRPFP62306 86 aaKnown RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 PPP2CBP62714 309 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 PPP2CAP67775 309 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 CCDC15Q0P6D6 951 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 DBPQ10586 325 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 CLCA4Q14CN2 919 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 PSMD6Q15008 389 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 IGFBP7Q16270 282 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SKIDA1Q1XH10 827 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SPDYAQ5MJ70 313 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 FAM46CQ5VWP2 391 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 CLEC20AQ6ZU45 233 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 RAB11FIP2Q7L804 512 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SCD5Q86SK9 330 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 CIR1Q86X95 450 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 MMAAQ8IVH4 418 aaKnown RBP5.55□□□□□ -1.52
PTCD3-207ENST00000467273 FBXO39Q8N4B4 442 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 KYQ8NBH2 561 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 HIPK4Q8NE63 616 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 FIBINQ8TAL6 211 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SLC2A14Q8TDB8 520 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SSC4DQ8WTU2 575 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 MIB2Q96AX9 1013 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 TBATAQ96M53 351 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 SPAG5Q96R06 1193 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 CGRRF1Q99675 332 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 IKZF4Q9H2S9 585 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 RASAL2Q9UJF2 1139 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 KIF3AQ9Y496 699 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 POLQO75417 2590 aa5.55□□□□□ -1.52
PTCD3-207ENST00000467273 A0A1W2PRQ8 180 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 FRMD3A2A2Y4 597 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TYW5A2RUC4 315 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 GOLGA8IPA6NC78 632 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 KLHL33A6NCF5 533 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 GOLGA8JA6NMD2 632 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 A6NNZ2 444 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 PRSS47A8MTI9 375 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 NTN3O00634 580 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ALOX15BO15296 676 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 RFPL1O75677 317 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 AGFG2O95081 481 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 PF4V1P10720 104 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 CCDC130P13994 396 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 AOAHP28039 575 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TNFRSF8P28908 595 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 SLC6A4P31645 630 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 AKT2P31751 481 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 MC4RP32245 332 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 DRD3P35462 400 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 UGT1A5P35504 534 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 NNMTP40261 264 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 PDX1P52945 283 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 MANFP55145 182 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 SPIDRQ14159 915 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 FHL2Q14192 279 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 MLC1Q15049 377 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ACAP2Q15057 778 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 SNRNP35Q16560 246 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ZNF667Q5HYK9 610 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TOR2AQ5JU69 321 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 FHL5Q5TD97 284 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 CD276Q5ZPR3 534 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ESPNLQ6ZVH7 1005 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 RSRC2Q7L4I2 434 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 GPRIN1Q7Z2K8 1008 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 EFL1Q7Z2Z2 1120 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ABI3BPQ7Z7G0 1075 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ACOT1Q86TX2 421 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 CBWD2Q8IUF1 395 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 PHYKPLQ8IUZ5 450 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 LMNTD2Q8IXW0 634 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ZC3H3Q8IXZ2 948 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 FAM184AQ8NB25 1140 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 C9orf43Q8TAL5 461 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TAF4BQ92750 862 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 CCDC47Q96A33 483 aaKnown RBP5.54□□□□□ -1.52
PTCD3-207ENST00000467273 AZIN2Q96A70 460 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 ARRDC3Q96B67 414 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 LMLNQ96KR4 655 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TUBGCP5Q96RT8 1024 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 UBXN6Q9BZV1 441 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 CXorf56Q9H5V9 222 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TCF7L1Q9HCS4 588 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 SLC39A2Q9NP94 309 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 DNAJC28Q9NX36 388 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TBC1D7Q9P0N9 293 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 LUZP4Q9P127 313 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 EDARQ9UNE0 448 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 GTF2A1LQ9UNN4 478 aa5.54□□□□□ -1.52
PTCD3-207ENST00000467273 TCAF1Q9Y4C2 921 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms