RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CARS2Q9HA77 564 aaKnown RBP11.58□□□□□ -0.56
CUX1-207ENST00000465461 ARNT2Q9HBZ2 717 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 IL26Q9NPH9 171 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
CUX1-207ENST00000465461 HACD3Q9P035 362 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 SPASTQ9UBP0 616 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 FKBPLQ9UIM3 349 aa11.58□□□□□ -0.56
CUX1-207ENST00000465461 MED19A0JLT2 244 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 C2orf81A6NN90 581 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 GAPDHSO14556 408 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 YY2O15391 372 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 LDB2O43679 373 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 SLC25A14O95258 325 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 LDOC1O95751 146 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 TOP3BO95985 862 aaKnown RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 KELP23276 732 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 AK4P27144 223 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 TEAD1P28347 426 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 SPAM1P38567 509 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 DCDC1P59894 354 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 ATP13A5Q4VNC0 1218 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 KHDC1Q4VXA5 237 aaKnown RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 SLCO6A1Q86UG4 719 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 KLHL7Q8IXQ5 586 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 DNAAF3Q8N9W5 541 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 BRSK1Q8TDC3 778 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 LRRC45Q96CN5 670 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 DNAJC1Q96KC8 554 aaKnown RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 C16orf45Q96MC5 204 aaPredicted RBP11.57□□□□□ -0.56
CUX1-207ENST00000465461 TOR4AQ9NXH8 423 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 SIRPGQ9P1W8 387 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 ATXN10Q9UBB4 475 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 SLC17A4Q9Y2C5 497 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 NEU2Q9Y3R4 380 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 PKP3Q9Y446 797 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 GPSM3Q9Y4H4 160 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 ST14Q9Y5Y6 855 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 DGKBQ9Y6T7 804 aa11.57□□□□□ -0.56
CUX1-207ENST00000465461 GOLGA6L10A0A0M3HER8 536 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 GLYATL1P3A0A0U1RQE8 302 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 TNFRSF10CO14798 259 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 DNAJC6O75061 913 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 SUN1O94901 812 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 CRTAMO95727 393 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ANXA6P08133 673 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 PRSS56P0CW18 603 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ZNF8P17098 575 aaPredicted RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 CDKN1CP49918 316 aaPredicted RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 BLKP51451 505 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ZNF140P52738 457 aaPredicted RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 CLDN6P56747 220 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 SESN2P58004 480 aaPredicted RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 ETF1P62495 437 aaKnown RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 CRADDP78560 199 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 MRPS25P82663 173 aaKnown RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 ANKRD22Q5VYY1 191 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 TAF8Q7Z7C8 310 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ADGRG6Q86SQ4 1221 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 NRROSQ86YC3 692 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 RAVER1Q8IY67 606 aaKnown RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 OR4C6Q8NH72 309 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 GLYATL1Q969I3 302 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
CUX1-207ENST00000465461 APOLD1Q96LR9 279 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 PLEKHG4BQ96PX9 1271 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ZSCAN5AQ9BUG6 496 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 OR2AG1Q9H205 316 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 CASS4Q9NQ75 786 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 RAD18Q9NS91 495 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ZNHIT2Q9UHR6 403 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 DOLKQ9UPQ8 538 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 PCNX2A6NKB5 2137 aa11.56□□□□□ -0.56
CUX1-207ENST00000465461 ARID1BQ8NFD5 2236 aaPredicted RBP11.55□□□□□ -0.56
CUX1-207ENST00000465461 DCHS1Q96JQ0 3298 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 LY6G6EA0A0G2JKS1 128 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 NEMP2A6NFY4 417 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 OR51F1A6NGY5 319 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ERI2A8K979 691 aaKnown RBP11.55□□□□□ -0.56
CUX1-207ENST00000465461 GOLGA8MH3BSY2 632 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CASC3O15234 703 aaKnown RBP11.55□□□□□ -0.56
CUX1-207ENST00000465461 TNFSF14O43557 240 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ECEL1O95672 775 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 PYGLP06737 847 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 FTH1P19P0C7X4 201 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 SPINK2P20155 84 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ADCY8P40145 1251 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 PTGIRP43119 386 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 XIAPP98170 497 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CTBSQ01459 385 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CDH17Q12864 832 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 PEX6Q13608 980 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 PROX2Q3B8N5 592 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 INAVAQ3KP66 663 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 PLA2G4EQ3MJ16 856 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 PYCR3Q53H96 274 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 CRTC3Q6UUV7 619 aa11.55□□□□□ -0.56
CUX1-207ENST00000465461 ZNF534Q76KX8 674 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms