RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 HOXB8P17481 243 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 GRIA2P42262 883 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 GK3PQ14409 553 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 C6orf10Q5SRN2 563 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 UGT3A1Q6NUS8 523 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 C8orf82Q6P1X6 216 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 DEFB128Q7Z7B8 93 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 CCDC97Q96F63 343 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 CCDC68Q9H2F9 335 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 SYTL2Q9HCH5 934 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 SPAG4Q9NPE6 437 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 SUCOQ9UBS9 1254 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 CD300AQ9UGN4 299 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 POLG2Q9UHN1 485 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 ZNF225Q9UK10 706 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 ASB1Q9Y576 335 aa18.59■□□□□ 0.57
TSPAN4-210ENST00000464987 IQCF5A8MTL0 148 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 NR5A2O00482 541 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 TMCC1O94876 653 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 C1RP00736 705 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 LPOP22079 712 aaPredicted RBP18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 ALDH7A1P49419 539 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 SLC7A2P52569 658 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 MTA1Q13330 715 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 RARS2Q5T160 578 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 ADGRF1Q5T601 910 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 UGT2A3Q6UWM9 527 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 LRRC43Q8N309 656 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 GALNT4Q8N4A0 578 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 FAM110BQ8TC76 370 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 DLG3Q92796 817 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 BHMTQ93088 406 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 PLD4Q96BZ4 506 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 BTBD9Q96Q07 612 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 SLC22A12Q96S37 553 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 SEMA6AQ9H2E6 1030 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 UBAP1Q9NZ09 502 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 TMEM181Q9P2C4 612 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 MAP10Q9P2G4 905 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 BCAP29Q9UHQ4 241 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 CROTQ9UKG9 612 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 TBC1D30Q9Y2I9 924 aa18.58■□□□□ 0.57
TSPAN4-210ENST00000464987 BTN3A1O00481 513 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 TSPAN12O95859 305 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 CAPN3P20807 821 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 HK3P52790 923 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 RAD51Q06609 339 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 VPS26BQ4G0F5 336 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 ZRANB3Q5FWF4 1079 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 KLHDC10Q6PID8 442 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 TTC16Q8NEE8 873 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 PDZD8Q8NEN9 1154 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 SLCO4A1Q96BD0 722 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 TUBGCP3Q96CW5 907 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 KLF16Q9BXK1 252 aaPredicted RBP18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 TRPM5Q9NZQ8 1165 aa18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 ARIH1Q9Y4X5 557 aaPredicted RBP18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 OAS3Q9Y6K5 1087 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-210ENST00000464987 CSPG5O95196 566 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 CHRM3P20309 590 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 STX1BP61266 288 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 ZXDBP98169 803 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 CDKL1Q00532 357 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 SCIMPQ6UWF3 145 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 DCBLD1Q8N8Z6 715 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 WFDC5Q8TCV5 224 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 EEF1AKMT1Q8WVE0 214 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 EID2BQ96D98 161 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 CAPNS2Q96L46 248 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 TRIM8Q9BZR9 551 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 CWH43Q9H720 699 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 TSR3Q9UJK0 312 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 FCF1Q9Y324 198 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 OBSL1O75147 1896 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 HGFP14210 728 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 ACADVLP49748 655 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 ATP4BP51164 291 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 DIO3P55073 304 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 ATXN7L2Q5T6C5 722 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 KIAA1841Q6NSI8 718 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 CHST9Q7L1S5 443 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 TMCO2Q7Z6W1 182 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 CARNMT1Q8N4J0 409 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 LRTOMTQ8WZ04 291 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 ASB2Q96Q27 587 aa18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 SARS2Q9NP81 518 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-210ENST00000464987 PIKFYVEQ9Y2I7 2098 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 C15orf38-AP3S2A0A0A6YYH1 394 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 HOXA2O43364 376 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 RPS17P08708 135 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 PKMP14618 531 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 TWF1Q12792 350 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 LCP2Q13094 533 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 GRM2Q14416 872 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 ARPINQ7Z6K5 226 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 APLFQ8IW19 511 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 CPNE9Q8IYJ1 553 aa18.56■□□□□ 0.56
TSPAN4-210ENST00000464987 RNF168Q8IYW5 571 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms