RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ASMTLO95671 621 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 IFNB1P01574 187 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 FGF1P05230 155 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 BPIP17213 487 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 GNPDA1P46926 289 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 WHAMMP3Q1A5X7 153 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 ZCCHC8Q6NZY4 707 aaKnown RBP16.92■□□□□ 0.3
VPS52-215ENST00000464425 RANBP10Q6VN20 620 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 MARK2Q7KZI7 788 aaKnown RBP16.92■□□□□ 0.3
VPS52-215ENST00000464425 GLT6D1Q7Z4J2 308 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 TAF8Q7Z7C8 310 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 PRUNE1Q86TP1 453 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 GKN2Q86XP6 184 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 KLHDC8BQ8IXV7 354 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 TTC30BQ8N4P2 665 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 FAM181AQ8N9Y4 354 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 CCL4L1Q8NHW4 92 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 TBL1YQ9BQ87 522 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 TRABDQ9H4I3 376 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 RAD18Q9NS91 495 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 SIRPGQ9P1W8 387 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 PAK5Q9P286 719 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 GULP1Q9UBP9 304 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 KLK13Q9UKR3 277 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 SLC17A4Q9Y2C5 497 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 PCDHGA1Q9Y5H4 931 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 U3KQA8 63 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 COL5A1P20908 1838 aaPredicted RBP16.91■□□□□ 0.3
VPS52-215ENST00000464425 CKMT1AP12532 417 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 ETS1P14921 441 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 ACP1P24666 158 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 HMGCLP35914 325 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 SHC2P98077 582 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 CKAP4Q07065 602 aaKnown RBP16.91■□□□□ 0.3
VPS52-215ENST00000464425 SPATA4Q8NEY3 305 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 SCG3Q8WXD2 468 aaKnown RBP16.91■□□□□ 0.3
VPS52-215ENST00000464425 COX14Q96I36 57 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 BOCQ9BWV1 1114 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 DDX47Q9H0S4 455 aaKnown RBP16.91■□□□□ 0.3
VPS52-215ENST00000464425 ARFGAP3Q9NP61 516 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 HACD3Q9P035 362 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 GPR34Q9UPC5 381 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 NEU2Q9Y3R4 380 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 GPSM3Q9Y4H4 160 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 MRFAP1Q9Y605 127 aa16.91■□□□□ 0.3
VPS52-215ENST00000464425 OAS3Q9Y6K5 1087 aaKnown RBP16.91■□□□□ 0.3
VPS52-215ENST00000464425 CPED1A4D0V7 1026 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 PSMD3O43242 534 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 GAS8O95995 478 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 RPL22P35268 128 aaKnown RBP16.9■□□□□ 0.3
VPS52-215ENST00000464425 FDFT1P37268 417 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 CLDN6P56747 220 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 DCDC1P59894 354 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 PTPRCAPQ14761 206 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 NR0B2Q15466 257 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 C6orf132Q5T0Z8 1188 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 ZNF648Q5T619 568 aaPredicted RBP16.9■□□□□ 0.3
VPS52-215ENST00000464425 LVRNQ6Q4G3 990 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 MARCH9Q86YJ5 346 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 SLC35F3Q8IY50 421 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 PDCD7Q8N8D1 485 aaKnown RBP16.9■□□□□ 0.3
VPS52-215ENST00000464425 GLIS1Q8NBF1 620 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 FAM46DQ8NEK8 389 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 ZSCAN5AQ9BUG6 496 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 CDH19Q9H159 772 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 PLEKHM1Q9Y4G2 1056 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 ARL5AQ9Y689 179 aa16.9■□□□□ 0.3
VPS52-215ENST00000464425 FAM149AA5PLN7 773 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 ERI2A8K979 691 aaKnown RBP16.89■□□□□ 0.29
VPS52-215ENST00000464425 ECEL1O95672 775 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 KRT14P02533 472 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 IVLP07476 585 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 ZSCAN5DPP0CG00 497 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 ADCY8P40145 1251 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 DUSP3P51452 185 aaPredicted RBP16.89■□□□□ 0.29
VPS52-215ENST00000464425 ILKQ13418 452 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 KCTD11Q693B1 232 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 DENND5AQ6IQ26 1287 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 GUSBP11Q6P575 273 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 SYDE1Q6ZW31 735 aaPredicted RBP16.89■□□□□ 0.29
VPS52-215ENST00000464425 SDR16C5Q8N3Y7 309 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 TRAM1L1Q8N609 369 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 GLMNQ92990 594 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 LRRC45Q96CN5 670 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 IL26Q9NPH9 171 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 EVA1BQ9NVM1 165 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 IL17CQ9P0M4 197 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 ZNHIT2Q9UHR6 403 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 PKP3Q9Y446 797 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 PRKAB1Q9Y478 270 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 KCTD3Q9Y597 815 aa16.89■□□□□ 0.29
VPS52-215ENST00000464425 LRP4O75096 1905 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 SLC25A14O95258 325 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 TPH1P17752 444 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
VPS52-215ENST00000464425 PTGIRP43119 386 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 RPIAP49247 311 aa16.88■□□□□ 0.29
VPS52-215ENST00000464425 CTBSQ01459 385 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms