RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CEP44Q9C0F1 390 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 IPPKQ9H8X2 491 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 PRDM16Q9HAZ2 1276 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 GALPQ9UBC7 116 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 TPRKBQ9Y3C4 175 aa9.04□□□□□ -0.96
HPS4-208ENST00000464362 IRS2Q9Y4H2 1338 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 RFXANKO14593 260 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 EPN2O95208 641 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 MAPK1P28482 360 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 RPL9P32969 192 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 RPS9P46781 194 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 SEPHS1P49903 392 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 DPY19L2P1Q6NXN4 242 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 GPR180Q86V85 440 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 TRAPPC5Q8IUR0 188 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 CRYBG2Q8N1P7 616 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 C2orf73Q8N5S3 287 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 SIDT2Q8NBJ9 832 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 ARRDC4Q8NCT1 418 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 SMOQ99835 787 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 TEX12Q9BXU0 123 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 TPK1Q9H3S4 243 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 AKTIPQ9H8T0 292 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 KANSL3Q9P2N6 904 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 EVLQ9UI08 416 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 NENFQ9UMX5 172 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 CLCA2Q9UQC9 943 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 PTGDR2Q9Y5Y4 395 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 A0A088AWK7 358 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 PRMT5O14744 637 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 VPS4BO75351 444 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 RPP40O75818 363 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 SERPINI2O75830 405 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 RECQL5O94762 991 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 SLC25A14O95258 325 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 SEC24AO95486 1093 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 DGKAP23743 735 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 GCAP28676 217 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 CDH5P33151 784 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 GPR15P49685 360 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 FLT3LGP49771 235 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 EPHB3P54753 998 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 HMGCS1Q01581 520 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 SOX4Q06945 474 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 BNIP2Q12982 314 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 RGS21Q2M5E4 152 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 ARMC4Q5T2S8 1044 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 RSBN1Q5VWQ0 802 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 TXNDC5Q8NBS9 432 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 SEPT8Q92599 483 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 CHID1Q9BWS9 393 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 PLGRKTQ9HBL7 147 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 SELENONQ9NZV5 590 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 RAB26Q9ULW5 256 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 GIT1Q9Y2X7 761 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 TNPO3Q9Y5L0 923 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 RAI2Q9Y5P3 530 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 SHANK3Q9BYB0 1731 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 AXIN1O15169 862 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 OAS1P00973 400 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 COL6A1P12109 1028 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 HOXB8P17481 243 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 CYP3A5P20815 502 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 FAM187BQ17R55 369 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 GALNT18Q6P9A2 607 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 ZC3H7AQ8IWR0 971 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 BBS7Q8IWZ6 715 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 ENDOVQ8N8Q3 282 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 RPL10LQ96L21 214 aaKnown RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 APOL4Q9BPW4 351 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 FANCEQ9HB96 536 aa9.03□□□□□ -0.96
HPS4-208ENST00000464362 SMPD3Q9NY59 655 aaPredicted RBP9.03□□□□□ -0.96
HPS4-208ENST00000464362 LRRC14BA6NHZ5 514 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 MATN2O00339 956 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 TSC22D2O75157 780 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 NDST3O95803 873 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 CHRM5P08912 532 aaPredicted RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 C4AP0C0L4 1744 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 C4BP0C0L5 1744 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 ACVRL1P37023 503 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 KPNA1P52294 538 aaPredicted RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 INCA1Q0VD86 236 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 LCP2Q13094 533 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 MAD2L1Q13257 205 aaPredicted RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 HNRNPDQ14103 355 aaKnown RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 DGKKQ5KSL6 1271 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 EPGNQ6UW88 154 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 XKR5Q6UX68 686 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 ADAMTSL2Q86TH1 951 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 HIPK1Q86Z02 1210 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 RTL3Q8N8U3 475 aaKnown RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 POC5Q8NA72 575 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 OR52J3Q8NH60 311 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 PYCR2Q96C36 320 aa9.02□□□□□ -0.96
HPS4-208ENST00000464362 OTUB1Q96FW1 271 aaPredicted RBP9.02□□□□□ -0.96
HPS4-208ENST00000464362 BTN2A3PQ96KV6 586 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms