RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, human

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP9X-204	ENST00000463829	BEST3	Q8N1M1	668 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	PCDH20	Q8N6Y1	951 aa	Known RBP	4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	HJURP	Q8NCD3	748 aa	Predicted RBP	4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	TANK	Q92844	425 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	RTP4	Q96DX8	246 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	MED30	Q96HR3	178 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	NUDCD1	Q96RS6	583 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	MEIS3	Q99687	375 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	PLK3	Q9H4B4	646 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	SEBOX	Q9HB31	216 aa	Predicted RBP	4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	MTMR10	Q9NXD2	777 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	SMARCAL1	Q9NZC9	954 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	ADD3	Q9UEY8	706 aa	Known RBP	4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	SWAP70	Q9UH65	585 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	NENF	Q9UMX5	172 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	KAT6B	Q8WYB5	2073 aa		4.23	□□□□□ -1.73
USP9X-204	ENST00000463829	hCG_1807616	A0A1W2PRN6	198 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829		H3BQ06	376 aa	Predicted RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	DAO	P14920	347 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	ANXA7	P20073	488 aa	Known RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	BDNF	P23560	247 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	ACADL	P28330	430 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	TKT	P29401	623 aa	Known RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	PDE1B	Q01064	536 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	EPS8	Q12929	822 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	CDC16	Q13042	620 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	SETMAR	Q53H47	684 aa	Predicted RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	KCNT1	Q5JUK3	1230 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	TAGAP	Q8N103	731 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	OR1J2	Q8NGS2	313 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	TRPC4AP	Q8TEL6	797 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	NUDCD2	Q8WVJ2	157 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	TAAR8	Q969N4	342 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	SAT2	Q96F10	170 aa	Predicted RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	RSRC1	Q96IZ7	334 aa	Known RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	EGLN2	Q96KS0	407 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	ZNF385A	Q96PM9	386 aa	Known RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	SPRY4	Q9C004	299 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	TMEM39B	Q9GZU3	492 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	PIGM	Q9H3S5	423 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	EPB41L5	Q9HCM4	733 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	C1RL	Q9NZP8	487 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	STK39	Q9UEW8	545 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	SIX4	Q9UIU6	781 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	CMAHP	Q9Y471	501 aa		4.22	□□□□□ -1.73
USP9X-204	ENST00000463829	IGKV2D-30	A0A075B6S6	120 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829		A0A1W2PQ09	198 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829		B4DLN1	442 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	HS3ST1	O14792	307 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	MID1	O15344	667 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	OGG1	O15527	345 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	KCNN4	O15554	427 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	SLC28A2	O43868	658 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	TPPP	O94811	219 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	KDM4B	O94953	1096 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	PAPSS2	O95340	614 aa	Predicted RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	PMS2P2	O95744	297 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	ICAM1	P05362	532 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	LDHC	P07864	332 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	POR	P16435	677 aa	Predicted RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	PON1	P27169	355 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	TNFRSF8	P28908	595 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	GCH1	P30793	250 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	CCKAR	P32238	428 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	PDLIM4	P50479	330 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	MRPL12	P52815	198 aa	Known RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	SREBF2	Q12772	1141 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	KIF5A	Q12840	1032 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	DLG1	Q12959	904 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	TNFAIP1	Q13829	316 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	SLC39A14	Q15043	492 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	MYLK3	Q32MK0	819 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	RARS2	Q5T160	578 aa	Known RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	NADSYN1	Q6IA69	706 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	ZNF280D	Q6N043	979 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	BRAT1	Q6PJG6	821 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	EPHX4	Q8IUS5	362 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	OR2AK2	Q8NG84	335 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	HM13	Q8TCT9	377 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	DNAAF4	Q8WXU2	420 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	RHBDF1	Q96CC6	855 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	CALML4	Q96GE6	196 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	MTERF1	Q99551	399 aa	Known RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	CMKLR1	Q99788	373 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	SRSF8	Q9BRL6	282 aa	Known RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	TMX4	Q9H1E5	349 aa	Predicted RBP	4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	CD93	Q9NPY3	652 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	ZNF224	Q9NZL3	707 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	FBXL2	Q9UKC9	423 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	TMEM5	Q9Y2B1	443 aa		4.21	□□□□□ -1.74
USP9X-204	ENST00000463829	MAGEA13P	A6NCF6	341 aa		4.2	□□□□□ -1.74
USP9X-204	ENST00000463829	EIF4E1B	A6NMX2	242 aa	Known RBP	4.2	□□□□□ -1.74
USP9X-204	ENST00000463829	SRRM3	A6NNA2	597 aa	Predicted RBP	4.2	□□□□□ -1.74
USP9X-204	ENST00000463829	MAP2K7	O14733	419 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms