RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CCNCP24863 283 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 CXCR5P32302 372 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 UGT1A3P35503 534 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 GARSP41250 739 aaKnown RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 ATP1A2P50993 1020 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 ARF5P84085 180 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 GBE1Q04446 702 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PPIDQ08752 370 aaKnown RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 RFTN1Q14699 578 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 IRF4Q15306 451 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 SIX1Q15475 284 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 PHF19Q5T6S3 580 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 KAZNQ674X7 775 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 CAPRIN2Q6IMN6 1127 aaKnown RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 TIGD7Q6NT04 549 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 ATCAYQ86WG3 371 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 CREG2Q8IUH2 290 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PCDH20Q8N6Y1 951 aaKnown RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 Q8N9G6 341 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 OR7D4Q8NG98 312 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 KIF18AQ8NI77 898 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 COG1Q8WTW3 980 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 MAML1Q92585 1016 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 TSACCQ96A04 125 aaPredicted RBP11.14□□□□□ -0.63
SSR3-202ENST00000463503 RAB7BQ96AH8 199 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 HMCESQ96FZ2 354 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PDXPQ96GD0 296 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.63
SSR3-202ENST00000463503 HEPHQ9BQS7 1158 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 CDH19Q9H159 772 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 ZDHHC6Q9H6R6 413 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 PDFQ9HBH1 243 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 HPCAL4Q9UM19 191 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 DOLKQ9UPQ8 538 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 ACTL7AQ9Y615 435 aa11.14□□□□□ -0.63
SSR3-202ENST00000463503 ZNF891A8MT65 544 aaPredicted RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 MAFKO60675 156 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 FGGP02679 453 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 FGF3P11487 239 aaPredicted RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 POU3F2P20265 443 aaPredicted RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 GKP32189 559 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 ACVRL1P37023 503 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 PAPOLAP51003 745 aaKnown RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 BLKP51451 505 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 DNA2P51530 1060 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 MLLT10P55197 1068 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 CDC20Q12834 499 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 HLTFQ14527 1009 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSR3-202ENST00000463503 CCNG2Q16589 344 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 CYP1B1Q16678 543 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 LACTB2Q53H82 288 aaPredicted RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 LRRC73Q5JTD7 316 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 RETSATQ6NUM9 610 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 ZNF572Q7Z3I7 529 aaPredicted RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 GKN2Q86XP6 184 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 TICAM1Q8IUC6 712 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 HID1Q8IV36 788 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 PLPP6Q8IY26 295 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 IL22RA1Q8N6P7 574 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 RCBTB1Q8NDN9 531 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 OR6K2Q8NGY2 324 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 SLC35B2Q8TB61 432 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 ACTL9Q8TC94 416 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 SCG3Q8WXD2 468 aaKnown RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 ISG20Q96AZ6 181 aaKnown RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 SLC45A3Q96JT2 553 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 HEMGNQ9BXL5 484 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 RDH14Q9HBH5 336 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 ATP13A1Q9HD20 1204 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
SSR3-202ENST00000463503 MFHAS1Q9Y4C4 1052 aa11.13□□□□□ -0.63
SSR3-202ENST00000463503 TACC2O95359 2948 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 K7EM74 188 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 HGSO14964 777 aaPredicted RBP11.12□□□□□ -0.63
SSR3-202ENST00000463503 MATN3O15232 486 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 NKX2-8O15522 239 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 AGFG2O95081 481 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 RASGRP1O95267 797 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 PEX11BO96011 259 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 PECAM1P16284 738 aaPredicted RBP11.12□□□□□ -0.63
SSR3-202ENST00000463503 NR1D1P20393 614 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 OAS2P29728 719 aaKnown RBP11.12□□□□□ -0.63
SSR3-202ENST00000463503 DYNLT1P63172 113 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 B4GALNT1Q00973 533 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
SSR3-202ENST00000463503 KLRB1Q12918 225 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 NFATC4Q14934 902 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 PRKD1Q15139 912 aaPredicted RBP11.12□□□□□ -0.63
SSR3-202ENST00000463503 LONRF2Q1L5Z9 754 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 MAP9Q49MG5 647 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 C14orf28Q4W4Y0 310 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 ZNF787Q6DD87 383 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 OGFOD3Q6PK18 319 aa11.12□□□□□ -0.63
SSR3-202ENST00000463503 NPNTQ6UXI9 565 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms