RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 MNAT1P51948 309 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PTPN5P54829 565 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 HSPA14Q0VDF9 509 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 GRSF1Q12849 480 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SGCGQ13326 291 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 HNRNPA1L2Q32P51 320 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SEL1L3Q68CR1 1132 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ANKS6Q68DC2 871 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 RAET1GQ6H3X3 334 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 KIAA1324Q6UXG2 1013 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 RGS9BPQ6ZS82 235 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 DET1Q7L5Y6 550 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 EFL1Q7Z2Z2 1120 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TRMT11Q7Z4G4 463 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SUGP1Q8IWZ8 645 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TTC30BQ8N4P2 665 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF513Q8N8E2 541 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PTGR2Q8N8N7 351 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CFAP61Q8NHU2 1237 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PIWIL2Q8TC59 973 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TMEM159Q96B96 161 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ALG14Q96F25 216 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SCRN2Q96FV2 425 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 C7orf26Q96N11 449 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SMIM14Q96QK8 99 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TRIB3Q96RU7 358 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 GDF15Q99988 308 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 P2RY13Q9BPV8 354 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SIKE1Q9BRV8 207 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CPEB1Q9BZB8 566 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 DRC3Q9H069 523 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 MTG2Q9H4K7 406 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PCDH12Q9NPG4 1184 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CACNA2D2Q9NY47 1150 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 HEY2Q9UBP5 337 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 NCKAP1Q9Y2A7 1128 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CAPN7Q9Y6W3 813 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TRPC5OSA6NMA1 111 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 C16orf96A6NNT2 1141 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 WNT9AO14904 365 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CLGNO14967 610 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 KPNA5O15131 536 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 LINC01565O15544 149 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 GREM1O60565 184 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 RNASEH2AO75792 299 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC25A14O95258 325 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 DNTTP04053 509 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC35E2BP0CK96 405 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 LAMP2P13473 410 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC26A3P40879 764 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ALDH18A1P54886 795 aaKnown RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SEC13P55735 322 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 MSLNQ13421 630 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 NFATC2Q13469 925 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ACAP2Q15057 778 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PDCD2Q16342 344 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CRY1Q16526 586 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PFKFB4Q16877 469 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 MAP7D1Q3KQU3 841 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 C2orf27AQ580R0 203 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 COL13A1Q5TAT6 717 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 FOXR1Q6PIV2 292 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TSPAN33Q86UF1 283 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PIM3Q86V86 326 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TRAPPC5Q8IUR0 188 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 DDIASQ8IXT1 998 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 KLHDC8BQ8IXV7 354 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CPNE9Q8IYJ1 553 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 NXPE1Q8N323 547 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 GPR150Q8NGU9 434 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PIH1D2Q8WWB5 315 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 MYLIPQ8WY64 445 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 INPP5DQ92835 1189 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 PPP1R36Q96LQ0 422 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 RAB3IPQ96QF0 476 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TRMOQ9BU70 441 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 GATA5Q9BWX5 397 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM126AQ9BYI3 521 aaPredicted RBP4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ABCG8Q9H221 673 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 KCTD5Q9NXV2 234 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 ZDHHC3Q9NYG2 299 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 KCNK4Q9NYG8 393 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CD84Q9UIB8 345 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 TMCO1Q9UM00 188 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CDYLQ9Y232 598 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC27A6Q9Y2P4 619 aa4.09□□□□□ -1.75
ATP13A3-206ENST00000461660 CXorf51AA0A1B0GTR3 108 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 NPIPB15A6NHN6 443 aaPredicted RBP4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 SPECC1L-ADORA2AF8WAN1 911 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 KLF11O14901 512 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 INPP4BO15327 924 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 HTRA2O43464 458 aaPredicted RBP4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 SIN3BO75182 1162 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 SKAP2O75563 359 aaPredicted RBP4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 CIB2O75838 187 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 SNUPNO95149 360 aaKnown RBP4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 PRLP01236 227 aa4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 ENO3P13929 434 aaPredicted RBP4.09□□□□□ -1.76
ATP13A3-206ENST00000461660 ARNTP27540 789 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms