RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 LINC01553A4QN01 128 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 M0QZ24 198 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 SOCS6O14544 535 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 OGG1O15527 345 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 TIMM44O43615 452 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 MITFO75030 526 aaPredicted RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 GAGE7O76087 117 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 BEST1O76090 585 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GLUD1P00367 558 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 EGFP01133 1207 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 ICAM1P05362 532 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 ADRB2P07550 413 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GAGE12FP0CL80 117 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GAGE12GP0CL81 117 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GAGE12IP0CL82 117 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 IGHV4-30-4P0DP06 118 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 AKR1B1P15121 316 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 STX2P32856 288 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 EIF2DP41214 584 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 APOBEC1P41238 236 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 PRCPP42785 496 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 FASLGP48023 281 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GLUD2P49448 558 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 PCYT1AP49585 367 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GPR143P51810 404 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 MFAP4P55083 255 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 IFI35P80217 286 aaPredicted RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 MRPS5P82675 430 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 DSC1Q08554 894 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 SREBF2Q12772 1141 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GRIK2Q13002 908 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GAGE1Q13065 139 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 GAGE4Q13068 117 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 DHX34Q14147 1143 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 DECR1Q16698 335 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 SLC36A4Q6YBV0 504 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 SDCCAG8Q86SQ7 713 aaPredicted RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 LINC00346Q8IVM7 164 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 DSELQ8IZU8 1212 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 TAGAPQ8N103 731 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 SCML4Q8N228 414 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 PCDH20Q8N6Y1 951 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 LSMEM1Q8N8F7 131 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 POC5Q8NA72 575 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 C1orf131Q8NDD1 294 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 SNRNP27Q8WVK2 155 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 APBB2Q92870 758 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 LRRC59Q96AG4 307 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 PHF21BQ96EK2 531 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 FIZ1Q96SL8 496 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 C1QTNF1Q9BXJ1 281 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 PDE7BQ9NP56 450 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 PAG1Q9NWQ8 432 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 C1RLQ9NZP8 487 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 OR14J1Q9UGF5 321 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 PADI3Q9ULW8 664 aa3.39□□□□□ -1.87
RFC4-211ENST00000460408 EXO1Q9UQ84 846 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 R3HDM2Q9Y2K5 976 aaKnown RBP3.39□□□□□ -1.87
RFC4-211ENST00000460408 KANSL1LA0AUZ9 987 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 hDV102S1A0JD36 115 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SRRM3A6NNA2 597 aaPredicted RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 B4DLN1 442 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 CTDSP2O14595 271 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 MAP2K7O14733 419 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SMAD9O15198 467 aaKnown RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 ADAM20O43506 726 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SERPINI2O75830 405 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 STARD3NLO95772 234 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 HIST1H2ABP04908 130 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 ZNF12P17014 697 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 HIST1H2ADP20671 130 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 IL11P20809 199 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 BDKRB2P30411 391 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SSTR2P30874 369 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SUOXP51687 545 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 MRPL12P52815 198 aaKnown RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 PNLIPRP2P54317 469 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 CSNK2A1P68400 391 aaPredicted RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 ECT2LQ008S8 904 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 LRMPQ12912 555 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 NFATC4Q14934 902 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 OASLQ15646 514 aaKnown RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 ATP13A5Q4VNC0 1218 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 DUS1LQ6P1R4 473 aaKnown RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 KCTD18Q6PI47 426 aaPredicted RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 HIST3H2AQ7L7L0 130 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 ATG9AQ7Z3C6 839 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 KBTBD6Q86V97 674 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 CSNK2A3Q8NEV1 391 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 OR8K5Q8NH50 307 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SPATA22Q8NHS9 363 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 TAAR8Q969N4 342 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SLC22A18Q96BI1 424 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 ERP27Q96DN0 273 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 SAT2Q96F10 170 aaPredicted RBP3.38□□□□□ -1.87
RFC4-211ENST00000460408 GAD1Q99259 594 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 KXD1Q9BQD3 176 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 EPB41L5Q9HCM4 733 aa3.38□□□□□ -1.87
RFC4-211ENST00000460408 NKIRAS2Q9NYR9 191 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms