RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 C10orf107Q8IVU9 208 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 CYP4Z2PQ8N1L4 340 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 KBTBD7Q8WVZ9 684 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 LPGAT1Q92604 370 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 CENPIQ92674 756 aaPredicted RBP6.18□□□□□ -1.42
VPS13D-202ENST00000460333 RNF38Q9H0F5 515 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 KAT8Q9H7Z6 458 aaKnown RBP6.18□□□□□ -1.42
VPS13D-202ENST00000460333 TLE6Q9H808 572 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 PNPOQ9NVS9 261 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 EMC3Q9P0I2 261 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 TMEM216Q9P0N5 145 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 MKLN1Q9UL63 735 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 MCM3APO60318 1980 aa6.18□□□□□ -1.42
VPS13D-202ENST00000460333 BCLAF3A2AJT9 711 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 AQP12BA6NM10 295 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF99A8MXY4 864 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CLDN5O00501 218 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RGS10O43665 173 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CHRNA1P02708 482 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 C7P10643 843 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CCL5P13501 91 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ENTPD1P49961 510 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 AKR1D1P51857 326 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CSHL1Q14406 222 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 BRMS1LQ5PSV4 323 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF697Q5TEC3 545 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 AQP12AQ8IXF9 295 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 COLGALT2Q8IYK4 626 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SLC35B2Q8TB61 432 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF296Q8WUU4 475 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RNFT2Q96EX2 444 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SUSD3Q96L08 255 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TEKT5Q96M29 485 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 Q96MT0 163 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 NODALQ96S42 347 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 B3GNT5Q9BYG0 378 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 REEP1Q9H902 201 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TLR8Q9NR97 1041 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PLA2G4CQ9UP65 541 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SLC30A1Q9Y6M5 507 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 LOC100506127A0A0U1RQW1 187 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PIPSLA2A3N6 862 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 E7ENX8 843 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 BOLA2-SMG1P6H3BVE0 249 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CCRL2O00421 344 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TMCC2O75069 709 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 KCNH1O95259 989 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 DHFRP00374 187 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 NELFEP18615 380 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 KLRC2P26717 231 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 IDH3AP50213 366 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RELAQ04206 551 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MERTKQ12866 999 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 DPYSL2Q16555 572 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SPATS1Q496A3 300 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SLC39A12Q504Y0 691 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 FAM171A1Q5VUB5 890 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 USP43Q70EL4 1123 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TMEM132CQ8N3T6 1108 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CBR4Q8N4T8 237 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 IPMKQ8NFU5 416 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 FBXO32Q969P5 355 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ISOC1Q96CN7 298 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MRPL48Q96GC5 212 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MRPL57Q9BQC6 102 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MECRQ9BV79 373 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CYP4F12Q9HCS2 524 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SARS2Q9NP81 518 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ADPRHL2Q9NX46 363 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZDHHC7Q9NXF8 308 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF224Q9NZL3 707 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 IFT80Q9P2H3 777 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TRMT6Q9UJA5 497 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RPS6KA6Q9UK32 745 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF232Q9UNY5 417 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PDE10AQ9Y233 779 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 FAM155AB1AL88 458 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 G3V2T6 193 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 GNB5O14775 395 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 FGF10O15520 208 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 RNASEH1O60930 286 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ADAMTS4O75173 837 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 LYPLA1O75608 230 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SERPINA1P01009 418 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CKBP12277 381 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MLNP12872 115 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ITGAXP20702 1163 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 BRCC3P46736 316 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 SLC7A2P52569 658 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 HNRNPFP52597 415 aaKnown RBP6.17□□□□□ -1.42
VPS13D-202ENST00000460333 DAOAP59103 153 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 CDC42P60953 191 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 MVKQ03426 396 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF235Q14590 738 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 TIGD5Q53EQ6 642 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 PYDC2Q56P42 97 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 KCNT2Q6UVM3 1135 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 ANKS3Q6ZW76 656 aa6.17□□□□□ -1.42
VPS13D-202ENST00000460333 HIPK1Q86Z02 1210 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms