RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 KIFC1Q9BW19 673 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 FRMD8Q9BZ67 464 aaPredicted RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 B4GALT6Q9UBX8 382 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 PSAT1Q9Y617 370 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 C1orf232A0A0U1RR37 186 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CXorf51AA0A1B0GTR3 108 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 MROH6A6NGR9 719 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 TOR1BO14657 336 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 MID1O15344 667 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 SPINT1O43278 529 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 SYNCRIPO60506 623 aaKnown RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 SOCS5O75159 536 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 PDGFBP01127 241 aaPredicted RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 CHRNB1P11230 501 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 HOXB2P14652 356 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ADRA1DP25100 572 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CA5AP35218 305 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 MAGEA9P43362 315 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 PPM1FP49593 454 aaPredicted RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 CDKN1CP49918 316 aaPredicted RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 PGGT1BP53609 377 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 FZD5Q13467 585 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ELAVL3Q14576 367 aaKnown RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 CDKN3Q16667 212 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 HSP90AA5PQ58FG0 334 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ZNF805Q5CZA5 627 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CEP85LQ5SZL2 805 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CAPRIN2Q6IMN6 1127 aaKnown RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 AADATQ8N5Z0 425 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 KCT2Q8NC54 265 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 JPH3Q8WXH2 748 aaPredicted RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 HDAC10Q969S8 669 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CLIP3Q96DZ5 547 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 RBM18Q96H35 190 aaKnown RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 RBM14Q96PK6 669 aaKnown RBP10.3□□□□□ -0.76
USP39-210ENST00000459775 TUBGCP5Q96RT8 1024 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 CENPHQ9H3R5 247 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 FAM96AQ9H5X1 160 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 LMAN1LQ9HAT1 526 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ZNF711Q9Y462 761 aa10.3□□□□□ -0.76
USP39-210ENST00000459775 ANKRD36A6QL64 1941 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 FAM237BA0A1B0GVD1 139 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 FAM170BA6NMN3 283 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 POLBP06746 335 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 MAPK8P45983 427 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 CLCN2P51788 898 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 ARPC4P59998 168 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 RAC1P63000 192 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 MRPS35P82673 323 aaKnown RBP10.29□□□□□ -0.76
USP39-210ENST00000459775 IFFO1Q0D2I5 559 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 CNTN1Q12860 1018 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 CAMK2GQ13555 558 aaPredicted RBP10.29□□□□□ -0.76
USP39-210ENST00000459775 RALGPS1Q5JS13 557 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 TSTD2Q5T7W7 516 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 STEAP4Q687X5 459 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 LRRC66Q68CR7 880 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 ABRAXAS1Q6UWZ7 409 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 DENND6AQ8IWF6 608 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 CTAGE3PQ8IX95 158 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 CYP4X1Q8N118 509 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 PPM1NQ8N819 430 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 LRRC39Q96DD0 335 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 ZNF641Q96N77 438 aaPredicted RBP10.29□□□□□ -0.76
USP39-210ENST00000459775 WRAP53Q9BUR4 548 aaKnown RBP10.29□□□□□ -0.76
USP39-210ENST00000459775 GPR63Q9BZJ6 419 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 ABCG8Q9H221 673 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 TREX1Q9NSU2 369 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 C20orf96Q9NUD7 363 aaPredicted RBP10.29□□□□□ -0.76
USP39-210ENST00000459775 MOCS1Q9NZB8 636 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 MARCH4Q9P2E8 410 aaPredicted RBP10.29□□□□□ -0.76
USP39-210ENST00000459775 CD84Q9UIB8 345 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 USP34Q70CQ2 3546 aa10.29□□□□□ -0.76
USP39-210ENST00000459775 HEATR9A2RTY3 570 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 PIP5K1CO60331 668 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 DIAPH2O60879 1101 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 GRIA4P48058 902 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 ARCN1P48444 511 aaKnown RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 POLD2P49005 469 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 PTSQ03393 145 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 CTBP1Q13363 440 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP39-210ENST00000459775 SLC14A2Q15849 920 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 ALS2CLQ60I27 953 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 KDM7AQ6ZMT4 941 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 CEP68Q76N32 757 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 DGLUCYQ7Z3D6 616 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 PTAR1Q7Z6K3 402 aaPredicted RBP10.28□□□□□ -0.76
USP39-210ENST00000459775 FAM124AQ86V42 546 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 TMPRSS6Q8IU80 811 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 PGBD3Q8N328 593 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 SPERTQ8NA61 448 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 KDM1BQ8NB78 822 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 OR6P1Q8NGX9 317 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 FAM81AQ8TBF8 368 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 ARL8AQ96BM9 186 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 SCRN2Q96FV2 425 aa10.28□□□□□ -0.76
USP39-210ENST00000459775 ATXN7L3BQ96GX2 97 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms