RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 RUVBL2Q9Y230 463 aaKnown RBP24.27■■□□□ 1.48
U2AF1-204ENST00000459639 PCDHB1Q9Y5F3 818 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 RGSL1A5PLK6 1076 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 PSMD11O00231 422 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 ESR1P03372 595 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 ACRV1P26436 265 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 TIAL1Q01085 375 aaKnown RBP eCLIP24.27■■□□□ 1.48
U2AF1-204ENST00000459639 ELP6Q0PNE2 266 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 PCLAFQ15004 111 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 FBXL19Q6PCT2 694 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 RAVER1Q8IY67 606 aaKnown RBP24.27■■□□□ 1.48
U2AF1-204ENST00000459639 RBFAQ8N0V3 343 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 RDH11Q8TC12 318 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 MECRQ9BV79 373 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 CDH19Q9H159 772 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 P2RY12Q9H244 342 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 TAS2R13Q9NYV9 303 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 COPG2Q9UBF2 871 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 PIAS3Q9Y6X2 628 aa24.27■■□□□ 1.48
U2AF1-204ENST00000459639 H0Y858 1186 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 PRMT5O14744 637 aaPredicted RBP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 OR1I1O60431 355 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 RHOBTB1O94844 696 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 LTA4HP09960 611 aaKnown RBP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 ZNF7P17097 686 aaPredicted RBP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 BGNP21810 368 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 RPS3P23396 243 aaKnown RBP eCLIP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 METAP1P53582 386 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 DLG1Q12959 904 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 CAMK2GQ13555 558 aaPredicted RBP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 ITGA9Q13797 1035 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 FAM83EQ2M2I3 478 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 FAM46CQ5VWP2 391 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 LRRC8EQ6NSJ5 796 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 HSD11B1LQ7Z5J1 315 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 PIM3Q86V86 326 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 MMAAQ8IVH4 418 aaKnown RBP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 NXPE1Q8N323 547 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 KCNV2Q8TDN2 545 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 ULK4Q96C45 1275 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 NXNL1Q96CM4 212 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 UBXN10Q96LJ8 280 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 GPR78Q96P69 363 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 CDX2Q99626 313 aaPredicted RBP24.26■■□□□ 1.47
U2AF1-204ENST00000459639 IGSF5Q9NSI5 407 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 LRRK1Q38SD2 2015 aa24.26■■□□□ 1.47
U2AF1-204ENST00000459639 ADRB3P13945 408 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 PSMD8P48556 350 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 CTSL3PQ5NE16 218 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 AGAP9Q5VTM2 703 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 LIPIQ6XZB0 460 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 HLA-CQ95604 372 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 MED16Q9Y2X0 877 aa24.25■■□□□ 1.47
U2AF1-204ENST00000459639 SPINT1O43278 529 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 DNAJC6O75061 913 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 PYGLP06737 847 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ELFN1P0C7U0 828 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 CPA3P15088 417 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 UGT1A6P19224 532 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 UGT1A1P22309 533 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 UGT1A4P22310 534 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ALDH3A1P30838 453 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 UGT1A3P35503 534 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 UGT1A5P35504 534 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 SEC13P55735 322 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 PDAP1Q13442 181 aaKnown RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 CSHL1Q14406 222 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ITIH4Q14624 930 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 SMAD2Q15796 467 aaKnown RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 TMEM196Q5HYL7 178 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 RFLNAQ6ZTI6 216 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ERN2Q76MJ5 926 aaKnown RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 HEXDCQ8WVB3 486 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 KCNJ9Q92806 393 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 SCYL1Q96KG9 808 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 HDAC8Q9BY41 377 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 PITPNM3Q9BZ71 974 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 RSPH9Q9H1X1 276 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 HEBP1Q9NRV9 189 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 AREL1O15033 823 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 EDF1O60869 148 aaKnown RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 VPS26AO75436 327 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 CCDC166P0CW27 439 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ZNF37AP17032 561 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 DRD1P21728 446 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 CA5AP35218 305 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 TIE1P35590 1138 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 WASP42768 502 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ATG16L1Q676U5 607 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 KLC3Q6P597 504 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 TMEM207Q6UWW9 146 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 FAM47EQ6ZV65 393 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 FSTL5Q8N475 847 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 RAB7BQ96AH8 199 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 GRAMD1AQ96CP6 724 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 CLPBQ9H078 707 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 FAM83DQ9H4H8 585 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 SYTL2Q9HCH5 934 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 SMOXQ9NWM0 555 aa24.24■■□□□ 1.47
U2AF1-204ENST00000459639 ITM2BQ9Y287 266 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms