RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 STRADAQ7RTN6 431 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CMC1Q7Z7K0 106 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SAPCD2Q86UD0 394 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SPATA2LQ8IUW3 424 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TMEM199Q8N511 208 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FIBCD1Q8N539 461 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 C1GALT1C1Q96EU7 318 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CRAMP1Q96RY5 1269 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 AGAP2Q99490 1192 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TAS2R9Q9NYW1 312 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 OGDHLQ9ULD0 1010 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PTPRJQ12913 1337 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 C12orf71A8MTZ7 269 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 E7ESA3 106 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 H0Y858 1186 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 BTN3A1O00481 513 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ARPC2O15144 300 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 AP2A2O94973 939 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TGM6O95932 706 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SPATA31C1P0DKV0 1188 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 UROSP10746 265 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 UNGP13051 313 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 HNRNPLP14866 589 aaKnown RBP eCLIP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TPH1P17752 444 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CHRNB2P17787 502 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CD53P19397 219 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ARPP19P56211 112 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 MAZP56270 477 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 BAATQ14032 418 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 COL9A3Q14050 684 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SIM2Q14190 667 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TRIM40Q6P9F5 258 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PAOXQ6QHF9 649 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CCBE1Q6UXH8 406 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SYVN1Q86TM6 617 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 AMIGO1Q86WK6 493 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TMEM17Q86X19 198 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SYT12Q8IV01 421 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 HID1Q8IV36 788 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 DCP1BQ8IZD4 617 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SLC15A4Q8N697 577 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PLD5Q8N7P1 536 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 UXS1Q8NBZ7 420 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 OR10T2Q8NGX3 314 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NRG4Q8WWG1 115 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SLC38A4Q969I6 547 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 UTP4Q969X6 686 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 RPF2Q9H7B2 306 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FOLH1BQ9HBA9 442 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TMEM138Q9NPI0 162 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 KLHL1Q9NR64 748 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 POLR3BQ9NW08 1133 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PTTG3PQ9NZH4 202 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NFKBIL1Q9UBC1 381 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NCKAP1Q9Y2A7 1128 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ST14Q9Y5Y6 855 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NCF1BA6NI72 391 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NCF1CA8MVU1 366 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TNFRSF10AO00220 468 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ZBTB24O43167 697 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 PSIP1O75475 530 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 C9P02748 559 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TFPTP0C1Z6 253 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SLC2A2P11168 524 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FGFR1P11362 822 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 NCF1P14598 390 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 CYP2A7P20853 494 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 DGKAP23743 735 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 HTR7P34969 479 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FEN1P39748 380 aaKnown RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 GRIA1P42261 906 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 GPX6P59796 221 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 LCP2Q13094 533 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SNAPC2Q13487 334 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SLC9B1Q4ZJI4 515 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ZNF484Q5JVG2 852 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 C6orf141Q5SZD1 244 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 LLGL2Q6P1M3 1020 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 DNAJC14Q6Y2X3 702 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ACOT1Q86TX2 421 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TMEM161BQ8NDZ6 487 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ABHD11Q8NFV4 315 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TWIST2Q8WVJ9 160 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 WNT8BQ93098 351 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SPATA33Q96N06 139 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 OR52E6Q96RD3 313 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 FAM83DQ9H4H8 585 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 GPN2Q9H9Y4 310 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 SEMA4BQ9NPR2 832 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ZIM2Q9NZV7 527 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 ZNRF3Q9ULT6 936 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 RNF6Q9Y252 685 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 TEX264Q9Y6I9 313 aa4.98□□□□□ -1.61
PCDH9-203ENST00000456367 LOC100130705A0A1B0GUX0 176 aa4.97□□□□□ -1.61
PCDH9-203ENST00000456367 RFXANKO14593 260 aa4.97□□□□□ -1.61
PCDH9-203ENST00000456367 FAM155BO75949 473 aa4.97□□□□□ -1.61
PCDH9-203ENST00000456367 AP2A1O95782 977 aa4.97□□□□□ -1.61
PCDH9-203ENST00000456367 CCR1P32246 355 aa4.97□□□□□ -1.61
PCDH9-203ENST00000456367 NNMTP40261 264 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms