RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 NR0B2Q15466 257 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 OASLQ15646 514 aaKnown RBP17.22■□□□□ 0.35
USP39-208ENST00000455732 GUSBP11Q6P575 273 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 RANBP10Q6VN20 620 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 TTC30BQ8N4P2 665 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 SLC25A41Q8N5S1 370 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 ARL10Q8N8L6 244 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
USP39-208ENST00000455732 PLEKHG4BQ96PX9 1271 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 TMEM168Q9H0V1 697 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 CARS2Q9HA77 564 aaKnown RBP17.22■□□□□ 0.35
USP39-208ENST00000455732 VPS18Q9P253 973 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 SUFUQ9UMX1 484 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 AURKAO14965 403 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 MT-CO3P00414 261 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 BPIP17213 487 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 GDF10P55107 478 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 PARP6Q2NL67 630 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 P3H1Q32P28 736 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 ZDHHC20Q5W0Z9 365 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 ARHGEF18Q6ZSZ5 1173 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 TRAM1L1Q8N609 369 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 GPR26Q8NDV2 337 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 DTX3LQ8TDB6 740 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 PTCD2Q8WV60 388 aaKnown RBP17.21■□□□□ 0.35
USP39-208ENST00000455732 ATG4AQ8WYN0 398 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 NAT6Q93015 286 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 TMEM121Q9BTD3 319 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 FICDQ9BVA6 458 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 MOSPD1Q9UJG1 213 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 LHX6Q9UPM6 363 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 ADAMTS20P59510 1910 aa17.21■□□□□ 0.35
USP39-208ENST00000455732 ATRXP46100 2492 aa17.21■□□□□ 0.34
USP39-208ENST00000455732 NBEAQ8NFP9 2946 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 SCN8AQ9UQD0 1980 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 CPED1A4D0V7 1026 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 INPP4BO15327 924 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 PPFIA2O75334 1257 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 AGTP01019 485 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 SLC4A1P02730 911 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 STIP1P31948 543 aaKnown RBP17.2■□□□□ 0.34
USP39-208ENST00000455732 POLD2P49005 469 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 ILF3Q12906 894 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP39-208ENST00000455732 RTP5Q14D33 572 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 SIX1Q15475 284 aaPredicted RBP17.2■□□□□ 0.34
USP39-208ENST00000455732 TCEA2Q15560 299 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 PERM1Q5SV97 790 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 KCTD11Q693B1 232 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 OGFOD3Q6PK18 319 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 DOK6Q6PKX4 331 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 EFL1Q7Z2Z2 1120 aaKnown RBP17.2■□□□□ 0.34
USP39-208ENST00000455732 GLT6D1Q7Z4J2 308 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 TAF8Q7Z7C8 310 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 TRIM74Q86UV6 250 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 KYQ8NBH2 561 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 LRRC45Q96CN5 670 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 NXPE2Q96DL1 559 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 SPATA16Q9BXB7 569 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 GSDMCQ9BYG8 508 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 NRSN2Q9GZP1 204 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 IL17CQ9P0M4 197 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 FEZ2Q9UHY8 353 aaPredicted RBP17.2■□□□□ 0.34
USP39-208ENST00000455732 GPR34Q9UPC5 381 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
USP39-208ENST00000455732 GPR89AB7ZAQ6 455 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 ZSCAN12O43309 604 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 DNAJC6O75061 913 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 GPR89BP0CG08 455 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 ADCY8P40145 1251 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 GNPDA1P46926 289 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 LRP8Q14114 963 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 ALS2CLQ60I27 953 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 DRICH1Q6PGQ1 229 aaPredicted RBP17.19■□□□□ 0.34
USP39-208ENST00000455732 NRROSQ86YC3 692 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 REXO1L1PQ8IX06 675 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 GPR156Q8NFN8 814 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 CCL4L1Q8NHW4 92 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 BLOC1S5Q8TDH9 187 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 MAIP1Q8WWC4 291 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 VPS35Q96QK1 796 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 OR2M4Q96R27 311 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 RMI1Q9H9A7 625 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 ARNT2Q9HBZ2 717 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP39-208ENST00000455732 PADI4Q9UM07 663 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 TMEM98Q9Y2Y6 226 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 OAS3Q9Y6K5 1087 aaKnown RBP17.19■□□□□ 0.34
USP39-208ENST00000455732 BPTFQ12830 3046 aa17.19■□□□□ 0.34
USP39-208ENST00000455732 METTL18O95568 372 aa17.18■□□□□ 0.34
USP39-208ENST00000455732 MSLNQ13421 630 aaPredicted RBP17.18■□□□□ 0.34
USP39-208ENST00000455732 PEX6Q13608 980 aa17.18■□□□□ 0.34
USP39-208ENST00000455732 CCNG2Q16589 344 aa17.18■□□□□ 0.34
USP39-208ENST00000455732 PYCR3Q53H96 274 aa17.18■□□□□ 0.34
USP39-208ENST00000455732 DENND5AQ6IQ26 1287 aa17.18■□□□□ 0.34
USP39-208ENST00000455732 GALNT13Q8IUC8 556 aa17.18■□□□□ 0.34
USP39-208ENST00000455732 PHYKPLQ8IUZ5 450 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms