RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 RAD54BQ9Y620 910 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 CCDC154A6NI56 674 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SYCE1LA8MT33 242 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SNNO75324 88 aaPredicted RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 KCNE1P15382 129 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 AOC1P19801 751 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 C1QTNF8P60827 252 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 RPL38P63173 70 aaKnown RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 SMAD3P84022 425 aaKnown RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 ITGADQ13349 1161 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 INSCQ1MX18 579 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 REP15Q6BDI9 236 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 C2orf73Q8N5S3 287 aaPredicted RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 LZTR1Q8N653 840 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 RTL3Q8N8U3 475 aaKnown RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 SNX19Q92543 992 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 ASB8Q9H765 288 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 ACTR8Q9H981 624 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 VTI1BQ9UEU0 232 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SMIM31A0A1B0GVY4 71 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 KLF11O14901 512 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 CRTAMO95727 393 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SERPIND1P05546 499 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 MYL4P12829 197 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 CCNCP24863 283 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 CDKN2DP55273 166 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 MTPNP58546 118 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 GALNT2Q10471 571 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 GRB7Q14451 532 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 VEPH1Q14D04 833 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 ZBTB6Q15916 424 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 TAZQ16635 292 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 C18orf21Q32NC0 220 aaPredicted RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 GCNT7Q6ZNI0 430 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 TMEM135Q86UB9 458 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 CENPLQ8N0S6 344 aaPredicted RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 APBB2Q92870 758 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 GATA6Q92908 595 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 TRIM62Q9BVG3 475 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 GPR62Q9BZJ7 368 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 AKTIPQ9H8T0 292 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 SPAG4Q9NPE6 437 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 TRPM5Q9NZQ8 1165 aa11.13□□□□□ -0.63
DDR1-240ENST00000454612 RCOR3Q9P2K3 495 aaPredicted RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 HEMK1Q9Y5R4 338 aaPredicted RBP11.13□□□□□ -0.63
DDR1-240ENST00000454612 H3BSA7 217 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 TRIM38O00635 465 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 TBL1XO60907 577 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 CCDC159P0C7I6 412 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 CYP4B1P13584 511 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 RPL5P46777 297 aaKnown RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 PPP3CCP48454 512 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 HSPA7P48741 367 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 MLLT6P55198 1093 aaPredicted RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 HMGCS1Q01581 520 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 DGCR6Q14129 220 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 FRG1Q14331 258 aaKnown RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 GSTA3Q16772 222 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 TMEM169Q96HH4 297 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 GPR22Q99680 433 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 STK39Q9UEW8 545 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 MYO10Q9HD67 2058 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 LAMA2P24043 3122 aaKnown RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 CAPN14A8MX76 684 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 SLCO1B7G3V0H7 640 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 KRT8P05787 483 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 AQP1P29972 269 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 NEK2P51955 445 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 MAPK11Q15759 364 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 UPP1Q16831 310 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ATG14Q6ZNE5 492 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 C11orf96Q7Z7L8 435 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 CAMK1DQ8IU85 385 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ZNF366Q8N895 744 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 TSPAN14Q8NG11 270 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 RMND5BQ96G75 393 aaPredicted RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 TSSK3Q96PN8 268 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 PRKD2Q9BZL6 878 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 DAPK2Q9UIK4 370 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ANKRD6Q9Y2G4 727 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 DOCK3Q8IZD9 2030 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 MAFKO60675 156 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 RNASEH2AO75792 299 aaKnown RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 GJB5O95377 273 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 C1RP00736 705 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ALBP02768 609 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 LBPP18428 481 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 FASP25445 335 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 FOXA1P55317 472 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 STXBP5Q5T5C0 1151 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 PIK3R6Q5UE93 754 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms