RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 CDKN1CP49918 316 aaPredicted RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 CDH13P55290 713 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 AP1S1P61966 158 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 CLCQ05315 142 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 TWF1Q12792 350 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 TRAP1Q12931 704 aaKnown RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 AGKQ53H12 422 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 IRAK1BP1Q5VVH5 260 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 CD200R1Q8TD46 325 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 TWIST2Q8WVJ9 160 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 USP13Q92995 863 aaPredicted RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 DEFB118Q96PH6 123 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 NUSAP1Q9BXS6 441 aaKnown RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 TUBB1Q9H4B7 451 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 ZNF334Q9HCZ1 680 aaPredicted RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 VPS51Q9UID3 782 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 FIS1Q9Y3D6 152 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 INSL5Q9Y5Q6 135 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 DPPA5A6NC42 116 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 PPP6CO00743 305 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 STX7O15400 261 aaKnown RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 NRP2O60462 931 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 TBL1XO60907 577 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 VPS4BO75351 444 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 VPS26AO75436 327 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 C8BP07358 591 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 MBL2P11226 248 aaPredicted RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 RFC2P35250 354 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 HMGCLP35914 325 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 PKNOX1P55347 436 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 SMAD3P84022 425 aaKnown RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 ZXDBP98169 803 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 GRIK2Q13002 908 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 PABPC1LQ4VXU2 614 aaKnown RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 ANKS6Q68DC2 871 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 DEFB128Q7Z7B8 93 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 STK40Q8N2I9 435 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 FBXO39Q8N4B4 442 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 ROPN1LQ96C74 230 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 TMEM169Q96HH4 297 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 NSUN5Q96P11 429 aaKnown RBP18.06■□□□□ 0.48
MECP2-205ENST00000453960 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 SLC30A3Q99726 388 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 MID1IP1Q9NPA3 183 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 TMEM181Q9P2C4 612 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 GALPQ9UBC7 116 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 RNF112Q9ULX5 631 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 FAM50BQ9Y247 325 aa18.06■□□□□ 0.48
MECP2-205ENST00000453960 HELZP42694 1942 aaKnown RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 LRRC14BA6NHZ5 514 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 LINGO3P0C6S8 592 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 UQCRBP14927 111 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 TSPAN8P19075 237 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 EPHB3P54753 998 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 FOXA1P55317 472 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 TLE2Q04725 743 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 ADGRE1Q14246 886 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 TRIM25Q14258 630 aaKnown RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 TSNQ15631 228 aaKnown RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 COQ5Q5HYK3 327 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 LPCAT4Q643R3 524 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 CAPRIN2Q6IMN6 1127 aaKnown RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 TMEM154Q6P9G4 183 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 CPXM2Q8N436 756 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 TSPEARQ8WU66 669 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 PIH1D2Q8WWB5 315 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 EID2BQ96D98 161 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 GPATCH1Q9BRR8 931 aaKnown RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 VCXQ9H320 206 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 SDR39U1Q9NRG7 319 aaPredicted RBP18.05■□□□□ 0.48
MECP2-205ENST00000453960 PACSIN3Q9UKS6 424 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 ZNF711Q9Y462 761 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 ST14Q9Y5Y6 855 aa18.05■□□□□ 0.48
MECP2-205ENST00000453960 E7ENX8 843 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 CDC7O00311 574 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 PIP5K1BO14986 540 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 HTRA2O43464 458 aaPredicted RBP18.04■□□□□ 0.48
MECP2-205ENST00000453960 PGLSO95336 258 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 GFAPP14136 432 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 RPS3P23396 243 aaKnown RBP eCLIP18.04■□□□□ 0.48
MECP2-205ENST00000453960 EEF1DP29692 281 aaKnown RBP18.04■□□□□ 0.48
MECP2-205ENST00000453960 CACNG1Q06432 222 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 TAF12Q16514 161 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 MPP7Q5T2T1 576 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 PAOXQ6QHF9 649 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 LINGO4Q6UY18 593 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 CERS6Q6ZMG9 384 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 CMTR2Q8IYT2 770 aaKnown RBP18.04■□□□□ 0.48
MECP2-205ENST00000453960 TMA16Q96EY4 203 aaKnown RBP18.04■□□□□ 0.48
MECP2-205ENST00000453960 EBF3Q9H4W6 596 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 FBRSL1Q9HCM7 1045 aaKnown RBP18.04■□□□□ 0.48
MECP2-205ENST00000453960 SLC52A3Q9NQ40 469 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 SPATS2LQ9NUQ6 558 aaKnown RBP18.04■□□□□ 0.48
MECP2-205ENST00000453960 TMEM45AQ9NWC5 275 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 CCDC167Q9P0B6 97 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 SCOCQ9UIL1 159 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 PCTPQ9UKL6 214 aa18.04■□□□□ 0.48
MECP2-205ENST00000453960 ASB3Q9Y575 518 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms