RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 MTF2Q9Y483 593 aaPredicted RBP5.97□□□□□ -1.45
SDC4P-201ENST00000453285 FADS3Q9Y5Q0 445 aa5.97□□□□□ -1.45
SDC4P-201ENST00000453285 SLC30A1Q9Y6M5 507 aa5.97□□□□□ -1.45
SDC4P-201ENST00000453285 FANCMQ8IYD8 2048 aa5.97□□□□□ -1.45
SDC4P-201ENST00000453285 LRP4O75096 1905 aa5.97□□□□□ -1.45
SDC4P-201ENST00000453285 CACNA1IQ9P0X4 2223 aa5.97□□□□□ -1.45
SDC4P-201ENST00000453285 ABCA7Q8IZY2 2146 aa5.96□□□□□ -1.45
SDC4P-201ENST00000453285 IGLV3-16A0A075B6K0 115 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 RGSL1A5PLK6 1076 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GOLGA8CPA6NN73 597 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 TARM1B6A8C7 271 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 C1QTNF3-AMACRE9PGA6 284 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 H0Y858 1186 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PSMD11O00231 422 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 MID1O15344 667 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 OR1I1O60431 355 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PLIN3O60664 434 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GLRA3O75311 464 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 NDUFS3O75489 264 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PRAMEF1O95521 474 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 KLF8O95600 359 aaPredicted RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PROCP04070 461 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GSTA1P08263 222 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 SBK3P0C264 359 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 COL6A2P12110 1019 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PKMP14618 531 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 STMN1P16949 149 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 TAC1P20366 129 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ITGALP20701 1170 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 SAT1P21673 171 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 C5AR1P21730 350 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CD9P21926 228 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 XPAP23025 273 aaPredicted RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 RPS3P23396 243 aaKnown RBP eCLIP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 NFKBIAP25963 317 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ACRV1P26436 265 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CRABP2P29373 138 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PMLP29590 882 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FMO4P31512 558 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 P2RY2P41231 377 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PTGER3P43115 390 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PSMD8P48556 350 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CCT5P48643 541 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 TTPAP49638 278 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 LIG3P49916 1009 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 SEC24CP53992 1094 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ADARP55265 1226 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 DCDC1P59894 354 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PFKPQ01813 784 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GRSF1Q12849 480 aaKnown RBP eCLIP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CNTN1Q12860 1018 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 NFATC2Q13469 925 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CCINQ13939 588 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ARHGEF7Q14155 803 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CST6Q15828 149 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PUS10Q3MIT2 529 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GPR33Q49SQ1 333 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ATP13A5Q4VNC0 1218 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 HENMT1Q5T8I9 393 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 N4BP2L1Q5TBK1 243 aaPredicted RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FAM46CQ5VWP2 391 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ZDHHC20Q5W0Z9 365 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FAM45BPQ6NSW5 357 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ERAP2Q6P179 960 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FBXL19Q6PCT2 694 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 KYAT3Q6YP21 454 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CERS6Q6ZMG9 384 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 RGS9BPQ6ZS82 235 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 Q6ZVL8 140 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 TAS2R42Q7RTR8 314 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 DSG4Q86SJ6 1040 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CENPLQ8N0S6 344 aaPredicted RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 NXPE1Q8N323 547 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GPATCH11Q8N954 259 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 TXNDC5Q8NBS9 432 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 OR2T3Q8NH03 318 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GDAP1Q8TB36 358 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FAM45AQ8TCE6 357 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 KCTD4Q8WVF5 259 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ANKRD49Q8WVL7 239 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FAM3CQ92520 227 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 SCAMP4Q969E2 229 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 RAB7BQ96AH8 199 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 NXNL1Q96CM4 212 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 MSANTD3Q96H12 275 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PPP1R16AQ96I34 528 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 UBXN10Q96LJ8 280 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 MAGEB18Q96M61 343 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FAM111AQ96PZ2 611 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 BOCQ9BWV1 1114 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 MKRN2Q9H000 416 aaKnown RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ABCG8Q9H221 673 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 FAM83DQ9H4H8 585 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 POPDC3Q9HBV1 291 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 IGSF5Q9NSI5 407 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 NKIRAS1Q9NYS0 192 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 PKD2L2Q9NZM6 624 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.96□□□□□ -1.46
SDC4P-201ENST00000453285 GALPQ9UBC7 116 aa5.96□□□□□ -1.46
SDC4P-201ENST00000453285 CD84Q9UIB8 345 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms