RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 COQ10AQ96MF6 247 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 KREMEN1Q96MU8 473 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 SYNCQ9H7C4 482 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 ACP6Q9NPH0 428 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 GOLGA6AQ9NYA3 693 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 LHX3Q9UBR4 397 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 OR12D3Q9UGF7 316 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 SNX7Q9UNH6 387 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 TMEM98Q9Y2Y6 226 aa12.45□□□□□ -0.42
AC004540.1-204ENST00000449537 PIKFYVEQ9Y2I7 2098 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 E2F3O00716 465 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 PMM2O15305 246 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 KLHL41O60662 606 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 AMD1P17707 334 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 SERPINA4P29622 427 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 LLGL1Q15334 1064 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 CACHD1Q5VU97 1274 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 Q6ZS92 163 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 BPHLQ86WA6 291 aaPredicted RBP12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 LZTR1Q8N653 840 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 GRHL3Q8TE85 626 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 TM9SF4Q92544 642 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 KLC2Q9H0B6 622 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
AC004540.1-204ENST00000449537 KIR2DS5A0A0G2JLQ3 304 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 A0A0G2JNG1 304 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 LILRA5A6NI73 299 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 KIR2DS3K7RE56 304 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 KCNN4O15554 427 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 SLC2A4P14672 509 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 TYRP1P17643 537 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 TEAD1P28347 426 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 ART1P52961 327 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 FKBP3Q00688 224 aaKnown RBP12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 NRG1Q02297 640 aaPredicted RBP12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 KIR2DS5Q14953 304 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 COBLL1Q53SF7 1204 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 TMCO4Q5TGY1 634 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 IZUMO3Q5VZ72 239 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 RAET1GQ6H3X3 334 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 MARK2Q7KZI7 788 aaKnown RBP12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 FAM131BQ86XD5 332 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 GALNT13Q8IUC8 556 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 PASD1Q8IV76 773 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 ZNF808Q8N4W9 903 aaPredicted RBP12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 AVL9Q8NBF6 648 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 C1orf131Q8NDD1 294 aaKnown RBP12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 EHBP1Q8NDI1 1231 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 FAR1Q8WVX9 515 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 KLHL6Q8WZ60 621 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 C14orf79Q96F83 325 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 HERPUD2Q9BSE4 406 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 ATP13A3Q9H7F0 1226 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 WASH6PQ9NQA3 447 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 OGFRQ9NZT2 677 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 SUCOQ9UBS9 1254 aaKnown RBP12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 TBC1D29Q9UFV1 150 aa12.43□□□□□ -0.42
AC004540.1-204ENST00000449537 FAM221AA4D161 298 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 OR5K4A6NMS3 321 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 KIF1CO43896 1103 aaKnown RBP12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 IPO13O94829 963 aaKnown RBP12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 UBXN7O94888 489 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 KLK3P07288 261 aaPredicted RBP12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 NELFEP18615 380 aaKnown RBP12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 CA5AP35218 305 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 TUBB3Q13509 450 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 CT47A1Q5JQC4 288 aaPredicted RBP12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 MANEALQ5VSG8 457 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 PRSS42Q7Z5A4 293 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 SRLQ86TD4 932 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 ZBTB2Q8N680 514 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 CHTF18Q8WVB6 975 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 ECHDC3Q96DC8 303 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 TRAPPC9Q96Q05 1148 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 CHST8Q9H2A9 424 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 KIAA1468Q9P260 1216 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 UBA2Q9UBT2 640 aaPredicted RBP12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 B4GALT6Q9UBX8 382 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 TCFL5Q9UL49 500 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 NEU2Q9Y3R4 380 aa12.42□□□□□ -0.42
AC004540.1-204ENST00000449537 P4HA2O15460 535 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 GRID2O43424 1007 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 SNX2O60749 519 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 RAB40ALP0C0E4 278 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 FOLR1P15328 257 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 ETV3P41162 512 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 GPR1P46091 355 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 CSNK1DP48730 415 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 YBEYP58557 167 aaPredicted RBP12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 BCL2L1Q07817 233 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 PNOCQ13519 176 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 STIM1Q13586 685 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 ATP1A4Q13733 1029 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 MYBPC3Q14896 1274 aa12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 CAVIN1Q6NZI2 390 aaKnown RBP12.41□□□□□ -0.42
AC004540.1-204ENST00000449537 CHST15Q7LFX5 561 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms