RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 INPP4BO15327 924 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 MT-CO3P00414 261 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 FGF1P05230 155 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 ANXA6P08133 673 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 GIMD1P0DJR0 217 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 TEAD1P28347 426 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 TRIM23P36406 574 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 SPINT3P49223 89 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 DPTQ07507 201 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 ELOCQ15369 112 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 SIRPB2Q5JXA9 342 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 NYAP1Q6ZVC0 841 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 GLT6D1Q7Z4J2 308 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 NRSN1Q8IZ57 195 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 CBARPQ8N350 705 aaPredicted RBP14.49□□□□□ -0.09
USP39-206ENST00000448971 FSTL5Q8N475 847 aaPredicted RBP14.49□□□□□ -0.09
USP39-206ENST00000448971 SLC35B2Q8TB61 432 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 BLOC1S5Q8TDH9 187 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 OR1E3Q8WZA6 343 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 PDLIM2Q96JY6 352 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 TBATAQ96M53 351 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 PPP1R2P1Q96PQ5 205 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 SRPK1Q96SB4 655 aaKnown RBP14.49□□□□□ -0.09
USP39-206ENST00000448971 TMEM121Q9BTD3 319 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 TEX101Q9BY14 249 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 MAGEE1Q9HCI5 957 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 CYP4F12Q9HCS2 524 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 MRPL40Q9NQ50 206 aaKnown RBP14.49□□□□□ -0.09
USP39-206ENST00000448971 EVA1BQ9NVM1 165 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 AAR2Q9Y312 384 aaKnown RBP14.49□□□□□ -0.09
USP39-206ENST00000448971 CSNK1G3Q9Y6M4 447 aa14.49□□□□□ -0.09
USP39-206ENST00000448971 MYO18BQ8IUG5 2567 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 SOD1P00441 154 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 TNFP01375 233 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 CELA2BP08218 269 aaPredicted RBP14.48□□□□□ -0.09
USP39-206ENST00000448971 HOXC4P09017 264 aaPredicted RBP14.48□□□□□ -0.09
USP39-206ENST00000448971 GDF10P55107 478 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 SLC1A5Q15758 541 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 CDKN3Q16667 212 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 P3H1Q32P28 736 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 CDCP2Q5VXM1 449 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 KCTD16Q68DU8 428 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 ZCCHC8Q6NZY4 707 aaKnown RBP14.48□□□□□ -0.09
USP39-206ENST00000448971 ADAMTSL4Q6UY14 1074 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 TRIM74Q86UV6 250 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 RAVER1Q8IY67 606 aaKnown RBP14.48□□□□□ -0.09
USP39-206ENST00000448971 HIC2Q96JB3 615 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 AGAP2Q99490 1192 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 GORASP1Q9BQQ3 440 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 TLR10Q9BXR5 811 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 FRMD8P1Q9BZ68 369 aaPredicted RBP14.48□□□□□ -0.09
USP39-206ENST00000448971 FAM83DQ9H4H8 585 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 CARS2Q9HA77 564 aaKnown RBP14.48□□□□□ -0.09
USP39-206ENST00000448971 RAD18Q9NS91 495 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 PCDHB1Q9Y5F3 818 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 SPO11Q9Y5K1 396 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 SPTA1P02549 2419 aa14.48□□□□□ -0.09
USP39-206ENST00000448971 LRP4O75096 1905 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 LOC285095A0A1B0GVY8 99 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 C5orf60A6NFR6 353 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 TNFRSF10CO14798 259 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 LIASO43766 372 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 CEP104O60308 925 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 GCATO75600 419 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 ASMTLO95671 621 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 IFNB1P01574 187 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 EPOP01588 193 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 FGGP02679 453 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 MSNP26038 577 aaKnown RBP14.47□□□□□ -0.09
USP39-206ENST00000448971 CXCR5P32302 372 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 GNPDA1P46926 289 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 CXADRP78310 365 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 CFHR1Q03591 330 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 SNX1Q13596 522 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 ZNF569Q5MCW4 686 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 HENMT1Q5T8I9 393 aaKnown RBP14.47□□□□□ -0.09
USP39-206ENST00000448971 GKN2Q86XP6 184 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 TAB3Q8N5C8 712 aaPredicted RBP14.47□□□□□ -0.09
USP39-206ENST00000448971 MAIP1Q8WWC4 291 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 C1orf54Q8WWF1 131 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 SCG3Q8WXD2 468 aaKnown RBP14.47□□□□□ -0.09
USP39-206ENST00000448971 APOLD1Q96LR9 279 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 APOL2Q9BQE5 337 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 SPATA16Q9BXB7 569 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 FRMD8Q9BZ67 464 aaPredicted RBP14.47□□□□□ -0.09
USP39-206ENST00000448971 CLPBQ9H078 707 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 TRABDQ9H4I3 376 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 USP29Q9HBJ7 922 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 TRMT1Q9NXH9 659 aaKnown RBP14.47□□□□□ -0.09
USP39-206ENST00000448971 HACD3Q9P035 362 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 ZNF148Q9UQR1 794 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 DGKBQ9Y6T7 804 aa14.47□□□□□ -0.09
USP39-206ENST00000448971 RGSL1A5PLK6 1076 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 LMO7DNF2Z398 122 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 ERVH48-1M5A8F1 160 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 AURKAO14965 403 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 KIF5CO60282 957 aa14.46□□□□□ -0.09
USP39-206ENST00000448971 DXOO77932 396 aaKnown RBP14.46□□□□□ -0.09
USP39-206ENST00000448971 AGTP01019 485 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms