RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 UVRAGQ9P2Y5 699 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 FADS2P1A8MWK0 482 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP28.05■■■□□ 2.08
CBX4-202ENST00000448310 STMND1H3BQB6 276 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 KCNK1O00180 336 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 SLC28A2O43868 658 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 JCHAINP01591 159 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 MMP2P08253 660 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 KRT7P08729 469 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 MX2P20592 715 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 FASLGP48023 281 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 RPL26P61254 145 aaKnown RBP28.05■■■□□ 2.08
CBX4-202ENST00000448310 NFATC3Q12968 1075 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 SQSTM1Q13501 440 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 QPCTQ16769 361 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 SFRP1Q8N474 314 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 AGBL5Q8NDL9 886 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 HTR3CQ8WXA8 447 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 CTNNBL1Q8WYA6 563 aaPredicted RBP28.05■■■□□ 2.08
CBX4-202ENST00000448310 OCIAD1Q9NX40 245 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 RPL26L1Q9UNX3 145 aaKnown RBP28.05■■■□□ 2.08
CBX4-202ENST00000448310 KCNK6Q9Y257 313 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 BOD1L1Q8NFC6 3051 aa28.05■■■□□ 2.08
CBX4-202ENST00000448310 ITGB2P05107 769 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 H2AFZP0C0S5 128 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 CSTF2P33240 577 aaKnown RBP eCLIP28.04■■■□□ 2.083e-7■□□□□ 10.7
CBX4-202ENST00000448310 SPINT3P49223 89 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 ZBTB17Q13105 803 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 TMEM71Q6P5X7 295 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 H2AFVQ71UI9 128 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 ZSCAN1Q8NBB4 408 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 AHCYL2Q96HN2 611 aaKnown RBP28.04■■■□□ 2.08
CBX4-202ENST00000448310 B3GALT1Q9Y5Z6 326 aa28.04■■■□□ 2.08
CBX4-202ENST00000448310 MYO18BQ8IUG5 2567 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 FAM87AP0C7U9 286 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 KDELR1P24390 212 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 GPLD1P80108 840 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 GALNT3Q14435 633 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 CHCHD2P9Q5T1J5 151 aaPredicted RBP28.03■■■□□ 2.08
CBX4-202ENST00000448310 HENMT1Q5T8I9 393 aaKnown RBP28.03■■■□□ 2.08
CBX4-202ENST00000448310 FAM129CQ86XR2 697 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 CNTD1Q8N815 330 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 RNF157Q96PX1 679 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 MLPHQ9BV36 600 aaPredicted RBP28.03■■■□□ 2.08
CBX4-202ENST00000448310 FAM83DQ9H4H8 585 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 PKD2L2Q9NZM6 624 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 VPS18Q9P253 973 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 TBC1D29Q9UFV1 150 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 PCDHGA3Q9Y5H0 932 aa28.03■■■□□ 2.08
CBX4-202ENST00000448310 TLN1Q9Y490 2541 aaKnown RBP28.03■■■□□ 2.08
CBX4-202ENST00000448310 EFCAB7A8K855 629 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 ANKRD66B4E2M5 251 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 ACP5P13686 325 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 NFATC2Q13469 925 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 MESDQ14696 234 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 SLC18A3Q16572 532 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 TBR1Q16650 682 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 SNAP47Q5SQN1 464 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 PRICKLE2Q7Z3G6 844 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 RAVER1Q8IY67 606 aaKnown RBP28.02■■■□□ 2.08
CBX4-202ENST00000448310 NKD1Q969G9 470 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 ZNF830Q96NB3 372 aaPredicted RBP28.02■■■□□ 2.08
CBX4-202ENST00000448310 DPYSL5Q9BPU6 564 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 CEP41Q9BYV8 373 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 XPO4Q9C0E2 1151 aaKnown RBP28.02■■■□□ 2.08
CBX4-202ENST00000448310 ARFGAP3Q9NP61 516 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 SLC39A1Q9NY26 324 aa28.02■■■□□ 2.08
CBX4-202ENST00000448310 LRRD1A4D1F6 860 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 A8MU76 341 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 SNX2O60749 519 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 HNRNPH3P31942 346 aaKnown RBP28.01■■■□□ 2.07
CBX4-202ENST00000448310 HHEXQ03014 270 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 PPIDQ08752 370 aaKnown RBP28.01■■■□□ 2.07
CBX4-202ENST00000448310 LYSMD3Q7Z3D4 306 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 PLD5Q8N7P1 536 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 CCDC112Q8NEF3 446 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 OR10G6Q8NH81 332 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 CCHCR1Q8TD31 782 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 HEY1Q9Y5J3 304 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 SPTA1P02549 2419 aa28.01■■■□□ 2.07
CBX4-202ENST00000448310 DUX1O43812 170 aa28■■■□□ 2.07
CBX4-202ENST00000448310 MAN1A1P33908 653 aa28■■■□□ 2.07
CBX4-202ENST00000448310 UGT1A3P35503 534 aa28■■■□□ 2.07
CBX4-202ENST00000448310 ATP1A2P50993 1020 aa28■■■□□ 2.07
CBX4-202ENST00000448310 NFKB2Q00653 900 aa28■■■□□ 2.07
CBX4-202ENST00000448310 ZNF648Q5T619 568 aaPredicted RBP28■■■□□ 2.07
CBX4-202ENST00000448310 ANKS6Q68DC2 871 aa28■■■□□ 2.07
CBX4-202ENST00000448310 KDELC2Q7Z4H8 507 aa28■■■□□ 2.07
CBX4-202ENST00000448310 EID2BQ96D98 161 aa28■■■□□ 2.07
CBX4-202ENST00000448310 DDA1Q9BW61 102 aa28■■■□□ 2.07
CBX4-202ENST00000448310 BRD8Q9H0E9 1235 aa28■■■□□ 2.07
CBX4-202ENST00000448310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28■■■□□ 2.071e-6■■■□□ 16
CBX4-202ENST00000448310 PIRTP0C851 137 aa27.99■■■□□ 2.07
CBX4-202ENST00000448310 MAPK9P45984 424 aa27.99■■■□□ 2.07
CBX4-202ENST00000448310 IFI35P80217 286 aaPredicted RBP27.99■■■□□ 2.07
CBX4-202ENST00000448310 ASTE1Q2TB18 679 aaPredicted RBP27.99■■■□□ 2.07
CBX4-202ENST00000448310 ALS2CLQ60I27 953 aa27.99■■■□□ 2.07
CBX4-202ENST00000448310 IYDQ6PHW0 289 aa27.99■■■□□ 2.07
CBX4-202ENST00000448310 IL22RA1Q8N6P7 574 aa27.99■■■□□ 2.07
CBX4-202ENST00000448310 FAM117AQ9C073 453 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms