RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 SERPINB11Q96P15 392 aa16.28■□□□□ 0.2
PBX3-207ENST00000447726 SEPHS2Q99611 448 aa16.28■□□□□ 0.2
PBX3-207ENST00000447726 KCTD14Q9BQ13 255 aaPredicted RBP16.28■□□□□ 0.2
PBX3-207ENST00000447726 ZYG11BQ9C0D3 744 aa16.28■□□□□ 0.2
PBX3-207ENST00000447726 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
PBX3-207ENST00000447726 RPF2Q9H7B2 306 aaKnown RBP16.28■□□□□ 0.2
PBX3-207ENST00000447726 POLR1BQ9H9Y6 1135 aa16.28■□□□□ 0.2
PBX3-207ENST00000447726 A0A1W2PPW3 197 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 NCF1BA6NI72 391 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 NCF1CA8MVU1 366 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 H3BMQ9 156 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 CRCPO75575 148 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TBX18O95935 607 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 GPIP06744 558 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 NCF1P14598 390 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 RHOQP17081 205 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 GPR15P49685 360 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 SUOXP51687 545 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 NRG1Q02297 640 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 LCP2Q13094 533 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TBPL2Q6SJ96 375 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TMEM26Q6ZUK4 368 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 DHRSXQ8N5I4 330 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 RHEBL1Q8TAI7 183 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 SLC39A13Q96H72 371 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 COG8Q96MW5 612 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 PTPN18Q99952 460 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 PLGRKTQ9HBL7 147 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 SMPD3Q9NY59 655 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 SLC45A1Q9Y2W3 748 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 UBA6A0AVT1 1052 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 MYADML2A6NDP7 307 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 GIPC1O14908 333 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 MGEA5O60502 916 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 CYBBP04839 570 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TFPTP0C1Z6 253 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 AGTR2P50052 363 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TSPY1Q01534 308 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 POLD3Q15054 466 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 TSNQ15631 228 aaKnown RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 FSCN1Q16658 493 aaKnown RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 FAM110CQ1W6H9 321 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 MRNIPQ6NTE8 343 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 ABRAXAS1Q6UWZ7 409 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 FBXO39Q8N4B4 442 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TEX26Q8N6G2 289 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 GOLM1Q8NBJ4 401 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 MIPOL1Q8TD10 442 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 ESAMQ96AP7 390 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TADA1Q96BN2 335 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 ACOX2Q99424 681 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 SLC30A3Q99726 388 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 C1orf50Q9BV19 199 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TRIM54Q9BYV2 358 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 TFB2MQ9H5Q4 396 aaKnown RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 INTS7Q9NVH2 962 aaKnown RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 ABI2Q9NYB9 513 aaPredicted RBP16.27■□□□□ 0.2
PBX3-207ENST00000447726 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.2
PBX3-207ENST00000447726 SH3PXD2BA1X283 911 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 M0QZQ0 153 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 ENPP3O14638 875 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 CD247P20963 164 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 CAPGP40121 348 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 RPS9P46781 194 aaKnown RBP16.26■□□□□ 0.19
PBX3-207ENST00000447726 KCNK10P57789 538 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 ACVR1Q04771 509 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 RCAN2Q14206 197 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 DDR2Q16832 855 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 SETMARQ53H47 684 aaPredicted RBP16.26■□□□□ 0.19
PBX3-207ENST00000447726 FGD3Q5JSP0 725 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 DCBLD1Q8N8Z6 715 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 TMEM248Q9NWD8 314 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 ZNF225Q9UK10 706 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 RNF112Q9ULX5 631 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 TLR6Q9Y2C9 796 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 MED16Q9Y2X0 877 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 CDC7O00311 574 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 HNRNPCP07910 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
PBX3-207ENST00000447726 ACVRL1P37023 503 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 TBX4P57082 545 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 NEDD8Q15843 81 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 UGT3A1Q6NUS8 523 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 KCTD8Q6ZWB6 473 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
PBX3-207ENST00000447726 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 PATL1Q86TB9 770 aaKnown RBP16.26■□□□□ 0.19
PBX3-207ENST00000447726 THEM5Q8N1Q8 247 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 KATNAL1Q9BW62 490 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 CD320Q9NPF0 282 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 CATSPERZQ9NTU4 200 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 CPA4Q9UI42 421 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 ANAPC2Q9UJX6 822 aa16.26■□□□□ 0.19
PBX3-207ENST00000447726 ZNF701M0R085 212 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms