RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ARID1BQ8NFD5 2236 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-207ENST00000445181 C2orf81A6NN90 581 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 FADS2P1A8MWK0 482 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 TAF4O00268 1085 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 BUD23O43709 281 aaKnown RBP23.78■■□□□ 1.4
C9orf3-207ENST00000445181 AP2A1O95782 977 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 POLD2P49005 469 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 DAB2P98082 770 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 PROX2Q3B8N5 592 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 ZDHHC20Q5W0Z9 365 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 KCTD11Q693B1 232 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 GKN2Q86XP6 184 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 KLHDC8BQ8IXV7 354 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 TRAM1L1Q8N609 369 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 PRELID2Q8N945 189 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 SCG3Q8WXD2 468 aaKnown RBP23.78■■□□□ 1.4
C9orf3-207ENST00000445181 CLPBQ9H078 707 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 ETNK1Q9HBU6 452 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 RAB6BQ9NRW1 208 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 TTC7AQ9ULT0 858 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-207ENST00000445181 SUFUQ9UMX1 484 aa23.78■■□□□ 1.4
C9orf3-207ENST00000445181 LMO7DNF2Z398 122 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 STX7O15400 261 aaKnown RBP23.77■■□□□ 1.4
C9orf3-207ENST00000445181 CELA2BP08218 269 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-207ENST00000445181 ZSCAN5DPP0CG00 497 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 GIMD1P0DJR0 217 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 GNPDA1P46926 289 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 TAF1AQ15573 450 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-207ENST00000445181 MARK2Q7KZI7 788 aaKnown RBP23.77■■□□□ 1.4
C9orf3-207ENST00000445181 LINC00523Q86TU6 105 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 COX14Q96I36 57 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 PLEKHG4BQ96PX9 1271 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 SMARCAL1Q9NZC9 954 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 IL17CQ9P0M4 197 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 NFKBIL1Q9UBC1 381 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-207ENST00000445181 SLC17A4Q9Y2C5 497 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 ARL5AQ9Y689 179 aa23.77■■□□□ 1.4
C9orf3-207ENST00000445181 LRP4O75096 1905 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 TRABD2BA6NFA1 517 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 ERI2A8K979 691 aaKnown RBP23.76■■□□□ 1.39
C9orf3-207ENST00000445181 TPP1O14773 563 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 YY2O15391 372 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 CRTAMO95727 393 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 JUPP14923 745 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 LPOP22079 712 aaPredicted RBP23.76■■□□□ 1.39
C9orf3-207ENST00000445181 SPAM1P38567 509 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 CLDN6P56747 220 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 ILKQ13418 452 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 PDPK2PQ6A1A2 396 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 DENND5AQ6IQ26 1287 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 ZCCHC8Q6NZY4 707 aaKnown RBP23.76■■□□□ 1.39
C9orf3-207ENST00000445181 TAF8Q7Z7C8 310 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 PROSER1Q86XN7 944 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 GLIS1Q8NBF1 620 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 MDM1Q8TC05 714 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 BRSK1Q8TDC3 778 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 ACTRT1Q8TDG2 376 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 MAGOHBQ96A72 148 aaKnown RBP23.76■■□□□ 1.39
C9orf3-207ENST00000445181 TMEM168Q9H0V1 697 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 ARNT2Q9HBZ2 717 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 EVA1BQ9NVM1 165 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.76■■□□□ 1.39
C9orf3-207ENST00000445181 CNOT6Q9ULM6 557 aaKnown RBP23.76■■□□□ 1.39
C9orf3-207ENST00000445181 GPSM3Q9Y4H4 160 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 SPEGQ15772 3267 aa23.76■■□□□ 1.39
C9orf3-207ENST00000445181 GOLGA6L10A0A0M3HER8 536 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 CES2O00748 559 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 ZNF185O15231 689 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 PPFIA2O75334 1257 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 SLC25A14O95258 325 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-207ENST00000445181 TCP1P17987 556 aaKnown RBP23.75■■□□□ 1.39
C9orf3-207ENST00000445181 RPL22P35268 128 aaKnown RBP23.75■■□□□ 1.39
C9orf3-207ENST00000445181 PDE1BQ01064 536 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 CAMK2BQ13554 666 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 C4orf22Q6V702 233 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 PPP1R21Q6ZMI0 780 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 SDR16C5Q8N3Y7 309 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 GLMNQ92990 594 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 APOLD1Q96LR9 279 aa23.75■■□□□ 1.39
C9orf3-207ENST00000445181 NAPGQ99747 312 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-207ENST00000445181 PIH1D1Q9NWS0 290 aaKnown RBP23.75■■□□□ 1.39
C9orf3-207ENST00000445181 GOLGA4Q13439 2230 aaKnown RBP23.75■■□□□ 1.39
C9orf3-207ENST00000445181 GLYATL1P3A0A0U1RQE8 302 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 GAS8O95995 478 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 IVLP07476 585 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 TPH1P17752 444 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 ACP1P24666 158 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 ILF3Q12906 894 aaKnown RBP eCLIP23.74■■□□□ 1.39
C9orf3-207ENST00000445181 C6orf132Q5T0Z8 1188 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 FAM151BQ6UXP7 276 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 GALNT13Q8IUC8 556 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 PHYKPLQ8IUZ5 450 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 DNAAF3Q8N9W5 541 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 FAM181AQ8N9Y4 354 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 OR4K2Q8NGD2 314 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 PTCD2Q8WV60 388 aaKnown RBP23.74■■□□□ 1.39
C9orf3-207ENST00000445181 GLYATL1Q969I3 302 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 ARFGAP3Q9NP61 516 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 IL26Q9NPH9 171 aa23.74■■□□□ 1.39
C9orf3-207ENST00000445181 NCKIPSDQ9NZQ3 722 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms