RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 CBARPQ8N350 705 aaPredicted RBP17.13■□□□□ 0.33
LIME1-202ENST00000444951 KDF1Q8NAX2 398 aaPredicted RBP17.13■□□□□ 0.33
LIME1-202ENST00000444951 CADM4Q8NFZ8 388 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 STYXQ8WUJ0 223 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 FOXJ1Q92949 421 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 AP2M1Q96CW1 435 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 MFSD3Q96ES6 412 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 C9orf72Q96LT7 481 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 WDR83Q9BRX9 315 aaKnown RBP17.13■□□□□ 0.33
LIME1-202ENST00000444951 KIFC1Q9BW19 673 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 SPATA16Q9BXB7 569 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 C1QTNF7Q9BXJ2 289 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 PARD6BQ9BYG5 372 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 FOXP3Q9BZS1 431 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 ABCG8Q9H221 673 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 FAM83DQ9H4H8 585 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 EBF2Q9HAK2 575 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 IL21RQ9HBE5 538 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 NLE1Q9NVX2 485 aaPredicted RBP17.13■□□□□ 0.33
LIME1-202ENST00000444951 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
LIME1-202ENST00000444951 EIF2B4Q9UI10 523 aaKnown RBP17.13■□□□□ 0.33
LIME1-202ENST00000444951 RPS6KL1Q9Y6S9 549 aa17.13■□□□□ 0.33
LIME1-202ENST00000444951 ZFYVE26Q68DK2 2539 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 MAGEB16A2A368 324 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 OR51F1A6NGY5 319 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 E7ESA3 106 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 SYPP08247 313 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 FAM153BP0C7A2 387 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 PGAM1P18669 254 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 SPAM1P38567 509 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 MAGEA4P43358 317 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 ARSDP51689 593 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 CLDN2P57739 230 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 LRRC14Q15048 493 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 IRF4Q15306 451 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 WSCD2Q2TBF2 565 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 FAM153CQ494X1 144 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 ANKRD20A4Q4UJ75 823 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 WDR45BQ5MNZ6 344 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 CCNI2Q6ZMN8 369 aaPredicted RBP17.12■□□□□ 0.33
LIME1-202ENST00000444951 NRSN1Q8IZ57 195 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 PLA2G15Q8NCC3 412 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 OR6P1Q8NGX9 317 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 PYROXD1Q8WU10 500 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 PTCD2Q8WV60 388 aaKnown RBP17.12■□□□□ 0.33
LIME1-202ENST00000444951 HDAC10Q969S8 669 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 SERAC1Q96JX3 654 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 TBATAQ96M53 351 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 AGAP2Q99490 1192 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 FAM96AQ9H5X1 160 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 MBNL1Q9NR56 388 aaKnown RBP17.12■□□□□ 0.33
LIME1-202ENST00000444951 RAD18Q9NS91 495 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 TEX264Q9Y6I9 313 aa17.12■□□□□ 0.33
LIME1-202ENST00000444951 FAM208BQ5VWN6 2430 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 PKD1L2Q7Z442 2459 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 GLYATL1P3A0A0U1RQE8 302 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 FAM237BA0A1B0GVD1 139 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 K7ESM1 405 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
LIME1-202ENST00000444951 LATO43561 262 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 POLBP06746 335 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 HNRNPA2B1P22626 353 aaKnown RBP17.11■□□□□ 0.33
LIME1-202ENST00000444951 AKT2P31751 481 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 HADHAP40939 763 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 PRAMEP78395 509 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 CHRNA6Q15825 494 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 ZRANB3Q5FWF4 1079 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 RAET1GQ6H3X3 334 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 PALM2Q8IXS6 379 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 PELI3Q8N2H9 469 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 CHCHD4Q8N4Q1 142 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 OR13J1Q8NGT2 312 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 LRRC39Q96DD0 335 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 CDKN2AIPNLQ96HQ2 116 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 FCRL3Q96P31 734 aaPredicted RBP17.11■□□□□ 0.33
LIME1-202ENST00000444951 PCED1AQ9H1Q7 454 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 MRM3Q9HC36 420 aaKnown RBP17.11■□□□□ 0.33
LIME1-202ENST00000444951 IL26Q9NPH9 171 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 AASDHPPTQ9NRN7 309 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 SUSD2Q9UGT4 822 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 TRPM6Q9BX84 2022 aa17.11■□□□□ 0.33
LIME1-202ENST00000444951 SCN8AQ9UQD0 1980 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 A0A1B0GTW7 788 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 CCDC162PA2VCL2 907 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 RGSL1A5PLK6 1076 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 GOLGA8TH3BQL2 631 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 GPR39O43194 453 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 UGT1A9O60656 530 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 VAPBO95292 243 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 UGT1A6P19224 532 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 UGT1A1P22309 533 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 UGT1A4P22310 534 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 CD27P26842 260 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 TNFRSF8P28908 595 aa17.1■□□□□ 0.33
LIME1-202ENST00000444951 MC4RP32245 332 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms