RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 HEATR9A2RTY3 570 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 MROH6A6NGR9 719 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 SLC30A4O14863 429 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 PRAMEF1O95521 474 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 CEACAM5P06731 702 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 DGKAP23743 735 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 MGAT1P26572 445 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 CA5AP35218 305 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 HK3P52790 923 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 HNRNPKP61978 463 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRPB-202ENST00000438552 WHAMMP3Q1A5X7 153 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF648Q5T619 568 aaPredicted RBP16.03■□□□□ 0.16
SNRPB-202ENST00000438552 RNASEH2BQ5TBB1 312 aaKnown RBP16.03■□□□□ 0.16
SNRPB-202ENST00000438552 ZDHHC20Q5W0Z9 365 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 PDPK2PQ6A1A2 396 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 LRRC8BQ6P9F7 803 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 KANSL1Q7Z3B3 1105 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 PHYKPLQ8IUZ5 450 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 NAXDQ8IW45 347 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 PPIL6Q8IXY8 311 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 NAT8LQ8N9F0 302 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 PPHLN1Q8NEY8 458 aaKnown RBP16.03■□□□□ 0.16
SNRPB-202ENST00000438552 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 SAP25Q8TEE9 199 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 GLYATL1Q969I3 302 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 RANBP9Q96S59 729 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 TRIM31Q9BZY9 425 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 CYP4F12Q9HCS2 524 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 NLE1Q9NVX2 485 aaPredicted RBP16.03■□□□□ 0.16
SNRPB-202ENST00000438552 SYBUQ9NX95 663 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 TMPRSS11EQ9UL52 423 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 TCAF1Q9Y4C2 921 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 PCDHGB2Q9Y5G2 931 aa16.03■□□□□ 0.16
SNRPB-202ENST00000438552 ZFC3H1O60293 1989 aaKnown RBP16.03■□□□□ 0.16
SNRPB-202ENST00000438552 RAD51CO43502 376 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 PCDHGA12O60330 932 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A9O60656 530 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 AVILO75366 819 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 RASGRP1O95267 797 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 CELA2BP08218 269 aaPredicted RBP16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A6P19224 532 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A1P22309 533 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A4P22310 534 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 IVDP26440 423 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A3P35503 534 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A5P35504 534 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 ARSDP51689 593 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 XIAPP98170 497 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 SLC14A1Q13336 389 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 KHDC1Q4VXA5 237 aaKnown RBP16.02■□□□□ 0.16
SNRPB-202ENST00000438552 PRRT3Q5FWE3 981 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 TSTD2Q5T7W7 516 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 MARK2Q7KZI7 788 aaKnown RBP16.02■□□□□ 0.16
SNRPB-202ENST00000438552 CAND1Q86VP6 1230 aaKnown RBP16.02■□□□□ 0.16
SNRPB-202ENST00000438552 LMX1AQ8TE12 382 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 STYXQ8WUJ0 223 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF778Q96MU6 729 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 CAMK1GQ96NX5 476 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 SERPINB12Q96P63 405 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 VPS35Q96QK1 796 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 SLC13A1Q9BZW2 595 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 CARS2Q9HA77 564 aaKnown RBP16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A7Q9HAW7 530 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A10Q9HAW8 530 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 UGT1A8Q9HAW9 530 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 SLC2A6Q9UGQ3 507 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 SLC17A4Q9Y2C5 497 aa16.02■□□□□ 0.16
SNRPB-202ENST00000438552 COL5A1P20908 1838 aaPredicted RBP16.02■□□□□ 0.16
SNRPB-202ENST00000438552 TNFRSF10CO14798 259 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 FFAR2O15552 330 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 FLRT2O43155 660 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 AQP9O43315 295 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 SH3BP5O60239 455 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 MTX2O75431 263 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 SRP72O76094 671 aaKnown RBP16.01■□□□□ 0.15
SNRPB-202ENST00000438552 SLC25A14O95258 325 aaPredicted RBP16.01■□□□□ 0.15
SNRPB-202ENST00000438552 ASMTLO95671 621 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 FUCA1P04066 466 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 ADRA1DP25100 572 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 MC4RP32245 332 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 HADHAP40939 763 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 GNPDA1P46926 289 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 SARNPP82979 210 aaKnown RBP16.01■□□□□ 0.15
SNRPB-202ENST00000438552 C1orf61Q13536 156 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 PEX6Q13608 980 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 ITGA9Q13797 1035 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 MPP5Q8N3R9 675 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 MCUQ8NE86 351 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 OR13J1Q8NGT2 312 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 GDAP1Q8TB36 358 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 SETD7Q8WTS6 366 aaKnown RBP16.01■□□□□ 0.15
SNRPB-202ENST00000438552 BTN2A2Q8WVV5 523 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 IL22Q9GZX6 179 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 XAB2Q9HCS7 855 aaKnown RBP16.01■□□□□ 0.15
SNRPB-202ENST00000438552 BFARQ9NZS9 450 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 APPL1Q9UKG1 709 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 SUFUQ9UMX1 484 aa16.01■□□□□ 0.15
SNRPB-202ENST00000438552 PCYT1BQ9Y5K3 369 aaPredicted RBP16.01■□□□□ 0.15
SNRPB-202ENST00000438552 DGKBQ9Y6T7 804 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms