RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 LURAP1LQ8IV03 231 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 MINDY1Q8N5J2 469 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 OR14L1PQ8NHC6 308 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 MGARPQ8TDB4 240 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZNF622Q969S3 477 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 SIPA1Q96FS4 1042 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 TMEM204Q9BSN7 226 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 H2AFJQ9BTM1 129 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 DCLK3Q9C098 648 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 HRH4Q9H3N8 390 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 CWC25Q9NXE8 425 aaPredicted RBP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 IL36RNQ9UBH0 155 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 GTF3C4Q9UKN8 822 aa3□□□□□ -1.93
HMGB1P9-201ENST00000429856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P9-201ENST00000429856 A0A0U1RQF3 1178 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 A0A1B0GVM2 712 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 LNP1A1A4G5 178 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 C1orf226A1L170 272 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 FAM157AC9JC47 383 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 KLRF2D3W0D1 207 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CLGNO14967 610 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 BCL10O95999 233 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 MT-CYBP00156 380 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ABCB1P08183 1280 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 SRPRAP08240 638 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 HOXC6P09630 235 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CTPS1P17812 591 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 SRD5A1P18405 259 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 GNLYP22749 145 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PTAFRP25105 342 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ACADLP28330 430 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 EEF1DP29692 281 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 HOXD3P31249 432 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 GP5P40197 560 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PIK3CAP42336 1068 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CDKN2AP42771 156 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 MSH2P43246 934 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PPP3CCP48454 512 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PNLIPRP2P54317 469 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 YWHAZP63104 245 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ADORA2A-AS1P86434 159 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 EGR4Q05215 589 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 DSC1Q08554 894 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ALCAMQ13740 583 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZNF674Q2M3X9 581 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 LETM2Q2VYF4 491 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ZSCAN23Q3MJ62 389 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CCDC92Q53HC0 331 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 FSCBQ5H9T9 825 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 TMEM71Q6P5X7 295 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 RBPMS2Q6ZRY4 209 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PIWIL3Q7Z3Z3 882 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CTU1Q7Z7A3 348 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PATL1Q86TB9 770 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 FBXL14Q8N1E6 418 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 XXYLT1Q8NBI6 393 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 KIF18AQ8NI77 898 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CEP76Q8TAP6 659 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 TMEM170AQ8WVE7 144 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ASB5Q8WWX0 329 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 URB1-AS1Q96HZ7 61 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 THOC3Q96J01 351 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 GFM1Q96RP9 751 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 NCAPGQ9BPX3 1015 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 MXRA8Q9BRK3 442 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 NTPCRQ9BSD7 190 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 HGH1Q9BTY7 390 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CCDC106Q9BWC9 280 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 GOLPH3LQ9H4A5 285 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 SLC28A3Q9HAS3 691 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 ARHGEF38Q9NXL2 777 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CRNNQ9UBG3 495 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 WNT16Q9UBV4 365 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 MYO6Q9UM54 1294 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 PCDHA7Q9UN72 937 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 R3HDM2Q9Y2K5 976 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 AAR2Q9Y312 384 aaKnown RBP2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 FAM96BQ9Y3D0 163 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 CMAHPQ9Y471 501 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 RAI2Q9Y5P3 530 aa2.99□□□□□ -1.93
HMGB1P9-201ENST00000429856 A4D1N5 150 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 LACTBL1A8MY62 500 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 H0YAE9 185 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 EBAG9O00559 213 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 SCAMP1O15126 338 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 ASAP2O43150 1006 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 SMAD6O43541 496 aaKnown RBP2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 RGS14O43566 566 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 ATP2C2O75185 946 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 NDUFS3O75489 264 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 SLC25A12O75746 678 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 MTA2O94776 668 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 CLDN7O95471 211 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 LCATP04180 440 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 T-ENOLP0DO92 83 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 ANXA7P20073 488 aaKnown RBP2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 ARRB2P32121 409 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 PRKCIP41743 596 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 CENPAP49450 140 aa2.98□□□□□ -1.93
HMGB1P9-201ENST00000429856 TMPRSS3P57727 454 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms