RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.19□□□□□ -1.9
LINC02541-201ENST00000427157 ZC2HC1CQ53FD0 456 aaPredicted RBP3.19□□□□□ -1.9
LINC02541-201ENST00000427157 STXBP4Q6ZWJ1 553 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 CPOQ8IVL8 374 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 ADSSL1Q8N142 457 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 NKAPQ8N5F7 415 aaKnown RBP3.19□□□□□ -1.9
LINC02541-201ENST00000427157 THAP6Q8TBB0 222 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 WDR20Q8TBZ3 569 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 HCAR2Q8TDS4 363 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 HERVK_113Q902F9 699 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 TAAR8Q969N4 342 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 ARHGEF26Q96DR7 871 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 ART5Q96L15 291 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 DCTN5Q9BTE1 182 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 ACSS1Q9NUB1 689 aaPredicted RBP3.19□□□□□ -1.9
LINC02541-201ENST00000427157 FBXL2Q9UKC9 423 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 PRSS21Q9Y6M0 314 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 RNF215Q9Y6U7 377 aa3.19□□□□□ -1.9
LINC02541-201ENST00000427157 A0A087X002 238 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 NCAM2O15394 837 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF821O75541 412 aaPredicted RBP3.18□□□□□ -1.9
LINC02541-201ENST00000427157 HOXB5P09067 269 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 COX7A2P14406 83 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ARCN1P48444 511 aaKnown RBP3.18□□□□□ -1.9
LINC02541-201ENST00000427157 GNAQP50148 359 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 COG7P83436 770 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 SPOCK1Q08629 439 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 DECR1Q16698 335 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ALG11Q2TAA5 492 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 COL28A1Q2UY09 1125 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 USP41Q3LFD5 358 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 C18orf63Q68DL7 685 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 SIGIRRQ6IA17 410 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ANO5Q75V66 913 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 MAP7D3Q8IWC1 876 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 LYG1Q8N1E2 194 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 SPATA5Q8NB90 893 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 SLC44A1Q8WWI5 657 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF653Q96CK0 615 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF689Q96CS4 500 aaPredicted RBP3.18□□□□□ -1.9
LINC02541-201ENST00000427157 ZBTB10Q96DT7 871 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 SENP5Q96HI0 755 aaPredicted RBP3.18□□□□□ -1.9
LINC02541-201ENST00000427157 PDZD7Q9H5P4 517 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 BICC1Q9H694 974 aaKnown RBP3.18□□□□□ -1.9
LINC02541-201ENST00000427157 RIC8AQ9NPQ8 531 aa3.18□□□□□ -1.9
LINC02541-201ENST00000427157 SMCHD1A6NHR9 2005 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 KIAA1210Q9ULL0 1709 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 A0A0G2JLW4 131 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 SNAP23O00161 211 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 PSMD14O00487 310 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 CSF2RAP15509 400 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF23P17027 643 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF26P17031 533 aaPredicted RBP3.17□□□□□ -1.9
LINC02541-201ENST00000427157 CDAP32320 146 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 GGT5P36269 586 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 APOBEC1P41238 236 aaKnown RBP3.17□□□□□ -1.9
LINC02541-201ENST00000427157 DSCR10P59022 87 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 FOXD4Q12950 439 aaPredicted RBP3.17□□□□□ -1.9
LINC02541-201ENST00000427157 GRIK2Q13002 908 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 FGFBP1Q14512 234 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ZFP69Q49AA0 526 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 SLC9B1Q4ZJI4 515 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 C6orf141Q5SZD1 244 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF790Q6PG37 636 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 CACNA2D4Q7Z3S7 1137 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 PIWIL4Q7Z3Z4 852 aaKnown RBP3.17□□□□□ -1.9
LINC02541-201ENST00000427157 RBM15BQ8NDT2 890 aaKnown RBP3.17□□□□□ -1.9
LINC02541-201ENST00000427157 APBB2Q92870 758 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 KLHL29Q96CT2 875 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 PPP1R13BQ96KQ4 1090 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 TMEM47Q9BQJ4 181 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ISCA1Q9BUE6 129 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 CDK19Q9BWU1 502 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ERVMER34-1Q9H9K5 563 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 MPP6Q9NZW5 540 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 PAK5Q9P286 719 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 ACAD8Q9UKU7 415 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 AAR2Q9Y312 384 aaKnown RBP3.17□□□□□ -1.9
LINC02541-201ENST00000427157 UTYO14607 1347 aa3.17□□□□□ -1.9
LINC02541-201ENST00000427157 OR5K3A6NET4 321 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 C5orf60A6NFR6 353 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 USP17L23D6RBM5 183 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 TNPO2O14787 897 aaKnown RBP3.16□□□□□ -1.9
LINC02541-201ENST00000427157 SEC31AO94979 1220 aaKnown RBP3.16□□□□□ -1.9
LINC02541-201ENST00000427157 CAVIN2O95810 425 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 TSHBP01222 138 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 MAP2K2P36507 400 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 UBA7P41226 1012 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 ITGA9Q13797 1035 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 DCST1Q5T197 706 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 PLEKHM3Q6ZWE6 761 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 DPPA4Q7L190 304 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 CCDC13Q8IYE1 715 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 SPAG16Q8N0X2 631 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 ZCCHC10Q8TBK6 192 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 ZNF473Q8WTR7 871 aaKnown RBP3.16□□□□□ -1.9
LINC02541-201ENST00000427157 PHF21AQ96BD5 680 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 ZSCAN31Q96LW9 406 aaPredicted RBP3.16□□□□□ -1.9
LINC02541-201ENST00000427157 ACOX2Q99424 681 aa3.16□□□□□ -1.9
LINC02541-201ENST00000427157 OPRPNQ99935 248 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms