RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FTCDO95954 541 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 CSF2RAP15509 400 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 MAP2K2P36507 400 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 NR2C2P49116 596 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 EFR3AQ14156 821 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 TAF5Q15542 800 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 TUBB8Q3ZCM7 444 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 ZNF280DQ6N043 979 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 ADSSL1Q8N142 457 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 BEST3Q8N1M1 668 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 FGFBP3Q8TAT2 258 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 RHBDF1Q96CC6 855 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 ELP4Q96EB1 424 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 GRAMD2BQ96HH9 432 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 VGLL1Q99990 258 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 IFIH1Q9BYX4 1025 aaKnown RBP4.3□□□□□ -1.72
LINC01040-201ENST00000425048 MARCH4Q9P2E8 410 aaPredicted RBP4.3□□□□□ -1.72
LINC01040-201ENST00000425048 JRKLQ9Y4A0 524 aa4.3□□□□□ -1.72
LINC01040-201ENST00000425048 UTYO14607 1347 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 MEIOCA2RUB1 952 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 TAF4O00268 1085 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 GABRB2P47870 512 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 MLLT10P55197 1068 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 CDH15P55291 814 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 TUBB2AQ13885 445 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 ZNF766Q5HY98 468 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 BSPRYQ5W0U4 402 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 HAPLN4Q86UW8 402 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 RBM4BQ9BQ04 359 aaKnown RBP4.29□□□□□ -1.72
LINC01040-201ENST00000425048 EIF2AK1Q9BQI3 630 aaKnown RBP4.29□□□□□ -1.72
LINC01040-201ENST00000425048 TRIM51Q9BSJ1 452 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 TUBB2BQ9BVA1 445 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 TKTL2Q9H0I9 626 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 ZBTB20Q9HC78 741 aaPredicted RBP4.29□□□□□ -1.72
LINC01040-201ENST00000425048 HCN3Q9P1Z3 774 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 HSPB7Q9UBY9 170 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 CACNG5Q9UF02 275 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 FBXL2Q9UKC9 423 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 ACAD8Q9UKU7 415 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 CEPT1Q9Y6K0 416 aa4.29□□□□□ -1.72
LINC01040-201ENST00000425048 DISP3Q9P2K9 1392 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 A0A1W2PPI3 338 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 DUXAA6NLW8 204 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 IRAK2O43187 625 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 DCXO43602 365 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 GUCY1B2O75343 617 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 SLC12A1Q13621 1099 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 KIR2DS3Q14952 304 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 DECR1Q16698 335 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 MYLK3Q32MK0 819 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 DCST1Q5T197 706 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 HIST2H2BDQ6DRA6 164 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 ACVR1CQ8NER5 493 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 MOCOSQ96EN8 888 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 MCRIP2Q9BUT9 160 aaKnown RBP4.28□□□□□ -1.72
LINC01040-201ENST00000425048 LRMDAQ9H2I8 198 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 RAD21L1Q9H4I0 556 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 BARHL2Q9NY43 387 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 PADI3Q9ULW8 664 aa4.28□□□□□ -1.72
LINC01040-201ENST00000425048 A6NL46 340 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 E9PQ18 207 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 CEACAM1P13688 526 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 ACVR2BQ13705 512 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 NFIL3Q16649 462 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 KIAA1644Q3SXP7 199 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 C18orf63Q68DL7 685 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 ANO5Q75V66 913 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 RRM2BQ7LG56 351 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 PIWIL4Q7Z3Z4 852 aaKnown RBP4.27□□□□□ -1.73
LINC01040-201ENST00000425048 DNAAF4Q8WXU2 420 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 CABLES2Q9BTV7 478 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 SEBOXQ9HB31 216 aaPredicted RBP4.27□□□□□ -1.73
LINC01040-201ENST00000425048 CNOT7Q9UIV1 285 aaKnown RBP4.27□□□□□ -1.73
LINC01040-201ENST00000425048 A4GNTQ9UNA3 340 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 SMCHD1A6NHR9 2005 aa4.27□□□□□ -1.73
LINC01040-201ENST00000425048 A0A1W2PNU3 283 aaPredicted RBP4.26□□□□□ -1.73
LINC01040-201ENST00000425048 PDE9AO76083 593 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 NR3C1P04150 777 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 PLA2G4BP0C869 781 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 ARL4CP56559 192 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 COG7P83436 770 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 RUNX1T1Q06455 604 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 SPOCK1Q08629 439 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 MORC3Q14149 939 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 QSOX2Q6ZRP7 698 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 CACNA2D4Q7Z3S7 1137 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 NRROSQ86YC3 692 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 SPICE1Q8N0Z3 855 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 RDM1Q8NG50 284 aa4.26□□□□□ -1.73
LINC01040-201ENST00000425048 SENP5Q96HI0 755 aaPredicted RBP4.26□□□□□ -1.73
LINC01040-201ENST00000425048 ZSCAN31Q96LW9 406 aaPredicted RBP4.26□□□□□ -1.73
LINC01040-201ENST00000425048 INTS2Q9H0H0 1204 aaKnown RBP4.26□□□□□ -1.73
LINC01040-201ENST00000425048 CCDC177Q9NQR7 707 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms