RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PCDH18Q9HCL0 1135 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 TBC1D29Q9UFV1 150 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 COL12A1Q99715 3063 aa16.72■□□□□ 0.27
UPF3AP3-201ENST00000420996 ATP1A1P05023 1023 aaKnown RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 EPHA4P54764 986 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 MC1RQ01726 317 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 NFATC2Q13469 925 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 PIGHQ14442 188 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 CRTC2Q53ET0 693 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 TXNRD3NBQ6F5E7 133 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 ALG1LQ6GMV1 187 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 SLC9B2Q86UD5 537 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 UNC5BQ8IZJ1 945 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 APOBEC4Q8WW27 367 aaKnown RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 HERPUD2Q9BSE4 406 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 ISCUQ9H1K1 167 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 EPB41L1Q9H4G0 881 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 RMI1Q9H9A7 625 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 APMAPQ9HDC9 416 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 ZNF71Q9NQZ8 489 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 CNOT6Q9ULM6 557 aaKnown RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 PRKAB1Q9Y478 270 aa16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 PCYT1BQ9Y5K3 369 aaPredicted RBP16.71■□□□□ 0.27
UPF3AP3-201ENST00000420996 POLR1CO15160 346 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 STK17BO94768 372 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 CLDN7O95471 211 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 SLC2A4P14672 509 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 KLHL30Q0D2K2 578 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 IHHQ14623 411 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 IGFBP7Q16270 282 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 E4F1Q66K89 784 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 LYSMD3Q7Z3D4 306 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 KDELC2Q7Z4H8 507 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 MAML1Q92585 1016 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 ABHD17AQ96GS6 310 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 WDR24Q96S15 920 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 RCOR3Q9P2K3 495 aaPredicted RBP16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 CHKBQ9Y259 395 aa16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 OAS3Q9Y6K5 1087 aaKnown RBP16.7■□□□□ 0.26
UPF3AP3-201ENST00000420996 KIR2DS5A0A0G2JLQ3 304 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 A0A0G2JNG1 304 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 CLEC18AA5D8T8 446 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 A6NCN8 305 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 OR5K4A6NMS3 321 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 KIR2DS3K7RE56 304 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 MATN3O15232 486 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 DLGAP3O95886 979 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 PRLP01236 227 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 F3P13726 295 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 IL4RP24394 825 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 OAS2P29728 719 aaKnown RBP16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 GARSP41250 739 aaKnown RBP16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 NOP2P46087 812 aaKnown RBP16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 RPL26P61254 145 aaKnown RBP16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 DSC2Q02487 901 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 MAP7Q14244 749 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 KIR2DS5Q14953 304 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 DEFB109BQ30KR1 87 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 CLEC18BQ6UXF7 455 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 PLXDC1Q8IUK5 500 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 AOPEPQ8N6M6 819 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 NIPA2Q8N8Q9 360 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 AVL9Q8NBF6 648 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 CLEC18CQ8NCF0 446 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 STARD8Q92502 1023 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 LYSMD1Q96S90 227 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 TDRD1Q9BXT4 1180 aaKnown RBP16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 AMACRQ9UHK6 382 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 RPL26L1Q9UNX3 145 aaKnown RBP16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 KCNK6Q9Y257 313 aa16.69■□□□□ 0.26
UPF3AP3-201ENST00000420996 SNX2O60749 519 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 NTRK1P04629 796 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 ACP5P13686 325 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 TCN2P20062 427 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 CA4P22748 312 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 STAT5AP42229 794 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 MAPK9P45984 424 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 SPINT3P49223 89 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 ZNF165P49910 485 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 GALNT2Q10471 571 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 SEPT6Q14141 434 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 KRT81Q14533 505 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 HENMT1Q5T8I9 393 aaKnown RBP16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 TIGD7Q6NT04 549 aaPredicted RBP16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 ESX1Q8N693 406 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 ARRDC2Q8TBH0 407 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 FAM71BQ8TC56 605 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 FATE1Q969F0 183 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 FAM83DQ9H4H8 585 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 HAUS2Q9NVX0 235 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 RBM22Q9NW64 420 aaKnown RBP eCLIP16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 CPNE7Q9UBL6 633 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 KLHL3Q9UH77 587 aa16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 MN1Q10571 1320 aaPredicted RBP16.68■□□□□ 0.26
UPF3AP3-201ENST00000420996 LILRA5A6NI73 299 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 FADS2P1A8MWK0 482 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms