RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SETXQ7Z333 2677 aaKnown RBP17.23■□□□□ 0.35
MSH6-203ENST00000420813 SPTA1P02549 2419 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 SSU72P8A0A1W2PR75 194 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 ANKRD66B4E2M5 251 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 DNAJC6O75061 913 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 ASMTLO95671 621 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 MMP2P08253 660 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 TMEM253P0C7T8 217 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 FGF3P11487 239 aaPredicted RBP17.22■□□□□ 0.35
MSH6-203ENST00000420813 KDELR1P24390 212 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 IFI35P80217 286 aaPredicted RBP17.22■□□□□ 0.35
MSH6-203ENST00000420813 QPCTQ16769 361 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 ASTE1Q2TB18 679 aaPredicted RBP17.22■□□□□ 0.35
MSH6-203ENST00000420813 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.22■□□□□ 0.35
MSH6-203ENST00000420813 ZFYVE27Q5T4F4 411 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 NKAIN2Q5VXU1 208 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 TMEM71Q6P5X7 295 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 ZSCAN1Q8NBB4 408 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 CCHCR1Q8TD31 782 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 SLC37A2Q8TED4 501 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 MLPHQ9BV36 600 aaPredicted RBP17.22■□□□□ 0.35
MSH6-203ENST00000420813 DDA1Q9BW61 102 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 PACSIN1Q9BY11 444 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 ADGRE3Q9BY15 652 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 FAM83DQ9H4H8 585 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 PDP2Q9P2J9 529 aa17.22■□□□□ 0.35
MSH6-203ENST00000420813 TLN1Q9Y490 2541 aaKnown RBP17.22■□□□□ 0.35
MSH6-203ENST00000420813 DUX1O43812 170 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 JCHAINP01591 159 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
MSH6-203ENST00000420813 CD86P42081 329 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 TRIM14Q14142 442 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 LINC00303Q3SY05 128 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 VASH2Q86V25 355 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 OR10G6Q8NH81 332 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 LRRN4Q8WUT4 740 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 RAPGEF5Q92565 580 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 DNAJC7Q99615 494 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 SLC38A3Q99624 504 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 XPO4Q9C0E2 1151 aaKnown RBP17.21■□□□□ 0.35
MSH6-203ENST00000420813 DEF6Q9H4E7 631 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 STN1Q9H668 368 aaKnown RBP17.21■□□□□ 0.35
MSH6-203ENST00000420813 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.35
MSH6-203ENST00000420813 ZNHIT2Q9UHR6 403 aa17.21■□□□□ 0.35
MSH6-203ENST00000420813 OAS3Q9Y6K5 1087 aaKnown RBP17.21■□□□□ 0.35
MSH6-203ENST00000420813 BOD1L1Q8NFC6 3051 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 FADS2P1A8MWK0 482 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 B4E171 279 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 KCNK1O00180 336 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 ATP1A1P05023 1023 aaKnown RBP17.2■□□□□ 0.34
MSH6-203ENST00000420813 SLC2A4P14672 509 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 TSPAN7P41732 249 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 ATP1A2P50993 1020 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 ARSDP51689 593 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 HHEXQ03014 270 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 ZBTB17Q13105 803 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
MSH6-203ENST00000420813 CNTD1Q8N815 330 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 EXD3Q8N9H8 876 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 SH3KBP1Q96B97 665 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 AHCYL2Q96HN2 611 aaKnown RBP17.2■□□□□ 0.34
MSH6-203ENST00000420813 ARHGAP9Q9BRR9 750 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 HERPUD2Q9BSE4 406 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 ASPSCR1Q9BZE9 553 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 CARD9Q9H257 536 aa17.2■□□□□ 0.34
MSH6-203ENST00000420813 NFKBIL1Q9UBC1 381 aaPredicted RBP17.2■□□□□ 0.34
MSH6-203ENST00000420813 PCYT1BQ9Y5K3 369 aaPredicted RBP17.2■□□□□ 0.34
MSH6-203ENST00000420813 ZNF106Q9H2Y7 1883 aaKnown RBP17.19■□□□□ 0.34
MSH6-203ENST00000420813 LRRD1A4D1F6 860 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 A6NCN8 305 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 ZIC2O95409 532 aaPredicted RBP17.19■□□□□ 0.34
MSH6-203ENST00000420813 EML2O95834 649 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 ARHGAP25P42331 645 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 RAB15P59190 212 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 DCDC1P59894 354 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 MESDQ14696 234 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 IYDQ6PHW0 289 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 WDR74Q6RFH5 385 aaPredicted RBP17.19■□□□□ 0.34
MSH6-203ENST00000420813 LYSMD3Q7Z3D4 306 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 AVL9Q8NBF6 648 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.19■□□□□ 0.34
MSH6-203ENST00000420813 EXTL1Q92935 676 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 ART4Q93070 314 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 NKD1Q969G9 470 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 TMEM9Q9P0T7 183 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 TBC1D29Q9UFV1 150 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 HEY1Q9Y5J3 304 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 B3GALT1Q9Y5Z6 326 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 MYO18BQ8IUG5 2567 aa17.19■□□□□ 0.34
MSH6-203ENST00000420813 TRBV23OR9-2A0A075B6M9 112 aa17.18■□□□□ 0.34
MSH6-203ENST00000420813 KIR2DS5A0A0G2JLQ3 304 aa17.18■□□□□ 0.34
MSH6-203ENST00000420813 A0A0G2JNG1 304 aa17.18■□□□□ 0.34
MSH6-203ENST00000420813 C3orf70A6NLC5 250 aaPredicted RBP17.18■□□□□ 0.34
MSH6-203ENST00000420813 OR5K4A6NMS3 321 aa17.18■□□□□ 0.34
MSH6-203ENST00000420813 GPR89AB7ZAQ6 455 aa17.18■□□□□ 0.34
MSH6-203ENST00000420813 KIR2DS3K7RE56 304 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms