RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CHI3L2Q15782 390 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 C2orf27AQ580R0 203 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 Q6ZVL8 140 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SNX20Q7Z614 316 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 HEXDCQ8WVB3 486 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SCAMP4Q969E2 229 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 TCF12Q99081 682 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 SLC30A3Q99726 388 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 MANSC1Q9H8J5 431 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 NMRAL1Q9HBL8 299 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 IGSF5Q9NSI5 407 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 ANKRD6Q9Y2G4 727 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 PIAS3Q9Y6X2 628 aa16.88■□□□□ 0.29
CALD1-204ENST00000417172 ANKRD12Q6UB98 2062 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 GSTA1P08263 222 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 CYP2A6P11509 494 aaPredicted RBP16.87■□□□□ 0.29
CALD1-204ENST00000417172 ITGALP20701 1170 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 ITGB7P26010 798 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 ATP13A5Q4VNC0 1218 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 C10orf107Q8IVU9 208 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 FSTL5Q8N475 847 aaPredicted RBP16.87■□□□□ 0.29
CALD1-204ENST00000417172 TMEM151AQ8N4L1 468 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 CLDN19Q8N6F1 224 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 TMIEQ8NEW7 156 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 ZNF398Q8TD17 642 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 SCYL1Q96KG9 808 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 ELAC2Q9BQ52 826 aaKnown RBP16.87■□□□□ 0.29
CALD1-204ENST00000417172 ACSS2Q9NR19 701 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 SIRPGQ9P1W8 387 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 APPL1Q9UKG1 709 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 COQ6Q9Y2Z9 468 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 STARD13Q9Y3M8 1113 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 PRSS21Q9Y6M0 314 aa16.87■□□□□ 0.29
CALD1-204ENST00000417172 G3V2L1 256 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 RHOBTB1O94844 696 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 KLHL2O95198 593 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 GM2AP17900 193 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 AARS2Q5JTZ9 985 aaKnown RBP16.86■□□□□ 0.29
CALD1-204ENST00000417172 LRRC8EQ6NSJ5 796 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 RGS9BPQ6ZS82 235 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 DPPA4Q7L190 304 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
CALD1-204ENST00000417172 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
CALD1-204ENST00000417172 NUDCD3Q8IVD9 361 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 CBARPQ8N350 705 aaPredicted RBP16.86■□□□□ 0.29
CALD1-204ENST00000417172 MOCOSQ96EN8 888 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 COPG2Q9UBF2 871 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 XPR1Q9UBH6 696 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 CRLS1Q9UJA2 301 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 TMPRSS11EQ9UL52 423 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 A0A087X1B8 175 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 TRBV5-4A0A0C4DH59 114 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.291e-8■□□□□ 11.3
CALD1-204ENST00000417172 ACRV1P26436 265 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 ENPP2Q13822 863 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 KIAA1211LQ6NV74 962 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 FBXL19Q6PCT2 694 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 GIMAP7Q8NHV1 300 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 SGF29Q96ES7 293 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 TSPAN17Q96FV3 270 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 UBXN10Q96LJ8 280 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 GUCD1Q96NT3 240 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 GPR21Q99679 349 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 C20orf27Q9GZN8 174 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 P2RY12Q9H244 342 aa16.86■□□□□ 0.29
CALD1-204ENST00000417172 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.86■□□□□ 0.29
CALD1-204ENST00000417172 ELFN1P0C7U0 828 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 FGF3P11487 239 aaPredicted RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 ADRB3P13945 408 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 PKMP14618 531 aaKnown RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 ZNF30P17039 623 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 PFKPQ01813 784 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 OVGP1Q12889 678 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 CCDC153Q494R4 210 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 PREPLQ4J6C6 727 aaPredicted RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 RNF187Q5TA31 235 aaPredicted RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 PAQR3Q6TCH7 311 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 LIPIQ6XZB0 460 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 OTOAQ7RTW8 1153 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 CNPY4Q8N129 248 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 NXPE1Q8N323 547 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 SIDT2Q8NBJ9 832 aaKnown RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 LKAAEAR1Q8TD35 194 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 PHF7Q9BWX1 381 aaPredicted RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 SPATA16Q9BXB7 569 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 PITPNM3Q9BZ71 974 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 SLC6A17Q9H1V8 727 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 CCDC68Q9H2F9 335 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 PKD2L2Q9NZM6 624 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 CORO1CQ9ULV4 474 aaPredicted RBP16.85■□□□□ 0.29
CALD1-204ENST00000417172 NUMA1Q14980 2115 aa16.85■□□□□ 0.29
CALD1-204ENST00000417172 MID1O15344 667 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 EDF1O60869 148 aaKnown RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 CPA3P15088 417 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 FOSL2P15408 326 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 ZNF37AP17032 561 aaPredicted RBP16.84■□□□□ 0.29
CALD1-204ENST00000417172 ITGB6P18564 788 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 CD72P21854 359 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 P2RY2P41231 377 aa16.84■□□□□ 0.29
CALD1-204ENST00000417172 PTGER3P43115 390 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms