RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 AZGP1P25311 298 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 L1CAMP32004 1257 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 UGT1A3P35503 534 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 UGT1A5P35504 534 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 BRCC3P46736 316 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 C6orf183Q5T699 404 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 GPRIN3Q6ZVF9 776 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 FAM35AQ86V20 835 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 COMMD2Q86X83 199 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 KLHL32Q96NJ5 620 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 COPS4Q9BT78 406 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 PTGFRNQ9P2B2 879 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ERGIC3Q9Y282 383 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 CCDC182A6NF36 153 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 TRAFD1O14545 582 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ASLP04424 464 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ANXA5P08758 320 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 TNNI3P19429 210 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 AOC1P19801 751 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ARF5P84085 180 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 LGALS3BPQ08380 585 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 VGLL4Q14135 290 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 UBE2J2Q8N2K1 259 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 TIMMDC1Q9NPL8 285 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ZNF222Q9UK12 451 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 MSCO60682 206 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 AP2A1O95782 977 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 NUDT14O95848 222 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 PTPN3P26045 913 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 GUCA1AP43080 201 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 RPS9P46781 194 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 CLCN5P51795 746 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 SDE2Q6IQ49 451 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 OR6K2Q8NGY2 324 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ZFP28Q8NHY6 868 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 FAM210AQ96ND0 272 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 OR52E6Q96RD3 313 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 TNPO3Q9Y5L0 923 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 YJEFN3A6XGL0 299 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 C9IYK1 514 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 HAT1O14929 419 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 SERPINA1P01009 418 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ALDOAP04075 364 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 URODP06132 367 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 RPS12P25398 132 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 GJA9P57773 515 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 PFKPQ01813 784 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 PCLAFQ15004 111 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ACOX1Q15067 660 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 KHDRBS2Q5VWX1 349 aaKnown RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 CDCA2Q69YH5 1023 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ARMCX6Q7L4S7 300 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 GPR180Q86V85 440 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 ANKRD46Q86W74 232 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 WDTC1Q8N5D0 677 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 GRIN3AQ8TCU5 1115 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 COX4I2Q96KJ9 171 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 GRIN3BO60391 1043 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 STX11O75558 287 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 RGS20O76081 388 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 EGFRP00533 1210 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 PSMA3P25788 255 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 SLC18A1P54219 525 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 MTPNP58546 118 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 KLHL12Q53G59 568 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 UNC93AQ86WB7 457 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 NKAPQ8N5F7 415 aaKnown RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 CCDC3Q9BQI4 270 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 ACAT2Q9BWD1 397 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 TMEM138Q9NPI0 162 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 ADGRE2Q9UHX3 823 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 A0A1W2PQ67 120 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 H7C4K7 107 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 NDUFB5O43674 189 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 SSNA1O43805 119 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 OR10H3O60404 316 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 CTPS1P17812 591 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 PITX1P78337 314 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-202ENST00000415950 MYLK3Q32MK0 819 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 HECTD2Q5U5R9 776 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 KRT74Q7RTS7 529 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 DSG4Q86SJ6 1040 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 ZNF410Q86VK4 478 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 TP53INP2Q8IXH6 220 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 FBXL20Q96IG2 436 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 KIFC1Q9BW19 673 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
SCN1B-202ENST00000415950 SIRPGQ9P1W8 387 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms